STRINGSTRING
APAF1 APAF1 CASP2 CASP2 MSX1 MSX1 BCL2 BCL2 CASP6 CASP6 MDM2 MDM2 CASP8 CASP8 SEMA7A SEMA7A CASP9 CASP9 WNT3 WNT3 GFAP GFAP CASP18 CASP18 CASP3 CASP3 CASP1 CASP1 ALPL ALPL PHEX PHEX BMF BMF CDH5 CDH5 PAX7 PAX7 RUNX2 RUNX2 SOST SOST BCL2L1 BCL2L1 NCAM1 NCAM1 IGF1R IGF1R ACTB ACTB MCL1 MCL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APAF1Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. (1249 aa)
CASP2Caspase-2 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. Might function by either activating some proteins required for cell death or inactivating proteins necessary for cell survival. (441 aa)
MSX1Homeobox protein GHOX-7; Probably plays a role in patterning events during embryonic limb development. May also be involved in programmed cell death. (288 aa)
BCL2Apoptosis regulator Bcl-2; Suppresses apoptosis in a variety of cell systems including factor-dependent lymphohematopoietic and neural cells. Regulates cell death by controlling the mitochondrial membrane permeability. Appears to function in a feedback loop system with caspases. Inhibits caspase activity either by preventing the release of cytochrome c from the mitochondria and/or by binding to the apoptosis-activating factor (APAF-1). (233 aa)
CASP6Uncharacterized protein; Belongs to the peptidase C14A family. (317 aa)
MDM2E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. (483 aa)
CASP8Uncharacterized protein; Belongs to the peptidase C14A family. (482 aa)
SEMA7ASema domain-containing protein; Belongs to the semaphorin family. (636 aa)
CASP9Caspase 9; Belongs to the peptidase C14A family. (418 aa)
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
GFAPGlial fibrillary acidic protein; Belongs to the intermediate filament family. (422 aa)
CASP18Initiator caspase; Belongs to the peptidase C14A family. (464 aa)
CASP3Caspase-3; Belongs to the peptidase C14A family. (283 aa)
CASP1Uncharacterized protein; Belongs to the peptidase C14A family. (540 aa)
ALPLAlkaline phosphatase, tissue-nonspecific isozyme; This isozyme plays a key role in skeletal mineralization by regulating levels of diphosphate (PPi); Belongs to the alkaline phosphatase family. (519 aa)
PHEXUncharacterized protein. (747 aa)
BMFUncharacterized protein. (200 aa)
CDH5Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. This cadherin may play a important role in endothelial cell biology through control of the cohesion and organization of the intercellular junctions. (773 aa)
PAX7PAX7 protein. (524 aa)
RUNX2Runt-related transcription factor. (472 aa)
SOSTSclerostin. (213 aa)
BCL2L1Bcl-2-like protein 1; Dominant regulator of apoptotic cell death. The long form displays cell death repressor activity, whereas the short isoform promotes apoptosis. Also acts as a regulator of G2 checkpoint and progression to cytokinesis during mitosis (By similarity). (229 aa)
NCAM1Neural cell adhesion molecule 1; This protein is a cell adhesion molecule involved in neuron- neuron adhesion, neurite fasciculation, outgrowth of neurites, etc. (1109 aa)
IGF1RTyrosine-protein kinase receptor. (1363 aa)
ACTBActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
MCL1Uncharacterized protein. (335 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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