STRINGSTRING
PCNA PCNA EP300 EP300 ORC4 ORC4 MCM5 MCM5 MCM4 MCM4 ORC3 ORC3 MCM3 MCM3 TFDP1 TFDP1 CCNA1 CCNA1 ATM ATM CCND2 CCND2 YWHAG YWHAG MCM6 MCM6 HDAC4 HDAC4 E2F3 E2F3 GADD45A GADD45A WEE1 WEE1 CCNE2 CCNE2 E2F5 E2F5 CHEK2 CHEK2 ESPL1 ESPL1 CDKN2A CDKN2A BUB1B BUB1B HDAC2 HDAC2 CDC14B CDC14B CDC25A CDC25A SMAD3 SMAD3 PRKDC PRKDC MAD2L1 MAD2L1 HDAC1 HDAC1 CCNH CCNH BUB3 BUB3 UBE2F UBE2F ORC5 ORC5 RB1 RB1 RBL1 RBL1 HDAC7 HDAC7 TBC1D8 TBC1D8 GSK3B GSK3B CDH1 CDH1 PTTG2 PTTG2 CDC45 CDC45 E2F4 E2F4 HDAC3 HDAC3 ATR ATR E2F1 E2F1 CDK1 CDK1 CCND3 CCND3 SKP2 SKP2 ABL1 ABL1 CCNB1 CCNB1 MAD1L1 MAD1L1 CCNE1 CCNE1 MAD2L2 MAD2L2 HDAC8 HDAC8 CDC14A CDC14A MCM2 MCM2 CDC7 CDC7 PLK1 PLK1 BUB1 BUB1 ORC2 ORC2 DBF4 DBF4 CDK6 CDK6 MDM2 MDM2 CDC20 CDC20 ORC1 ORC1 CCNA2 CCNA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
EP300E1A binding protein p300. (2450 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (530 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
MCM4DNA helicase; Belongs to the MCM family. (859 aa)
ORC3ORC_WH_C domain-containing protein. (713 aa)
MCM3DNA replication licensing factor MCM3; Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (812 aa)
TFDP1Transcription factor. (411 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (406 aa)
ATMNon-specific serine/threonine protein kinase. (3050 aa)
CCND2G1/S-specific cyclin-D2; Essential for the control of the cell cycle at the G1/S (start) transition; Belongs to the cyclin family. Cyclin D subfamily. (291 aa)
YWHAG14-3-3 protein gamma; Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner (By similarity); Belongs to the 14-3-3 family. (247 aa)
MCM6DNA helicase; Belongs to the MCM family. (825 aa)
HDAC4Histone deacetylase 4; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity). (1080 aa)
E2F3E2F transcription factor 3. (341 aa)
GADD45AGrowth arrest and DNA-damage-inducible protein 45 alpha. (157 aa)
WEE1Wee1-like protein kinase. (641 aa)
CCNE2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (405 aa)
E2F5E2F_TDP domain-containing protein. (375 aa)
CHEK2Uncharacterized protein. (524 aa)
ESPL1Extra spindle pole bodies like 1, separase. (2222 aa)
CDKN2AARF tumor suppressor. (60 aa)
BUB1BBUB1 N-terminal domain-containing protein. (1086 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity). (489 aa)
CDC14BUncharacterized protein. (499 aa)
CDC25ARhodanese domain-containing protein. (526 aa)
SMAD3Mothers against decapentaplegic homolog 3; Transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinase. SMAD3 is a receptor- regulated SMAD (R-SMAD) (By similarity). (426 aa)
PRKDCDNA-dependent protein kinase catalytic subunit; Serine/threonine-protein kinase that acts as a molecular sensor for DNA damage. Involved in DNA nonhomologous end joining (NHEJ) required for double-strand break (DSB) repair and V(D)J recombination. Must be bound to DNA to express its catalytic properties. Promotes processing of hairpin DNA structures in V(D)J recombination by activation of the hairpin endonuclease artemis (DCLRE1C). The assembly of the DNA-PK complex at DNA ends is also required for the NHEJ ligation step. Required to protect and align broken ends of DNA. May also act a [...] (4132 aa)
MAD2L1HORMA domain-containing protein. (206 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity); Belongs to the histone deacetylase family. HD type 1 subfamily. (480 aa)
CCNHCyclin H; Belongs to the cyclin family. (322 aa)
BUB3WD_REPEATS_REGION domain-containing protein. (392 aa)
UBE2FNEDD8-conjugating enzyme UBE2F; Accepts the ubiquitin-like protein NEDD8 from the UBA3-NAE1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase RBX2, but not RBX1, suggests that the RBX2-UBE2F complex neddylates specific target proteins, such as CUL5; Belongs to the ubiquitin-conjugating enzyme family. UBE2F subfamily. (272 aa)
ORC5AAA_16 domain-containing protein. (459 aa)
RB1Retinoblastoma-associated protein; Key regulator of entry into cell division that acts as a tumor suppressor. Acts as a transcription repressor of E2F1 target genes. Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases SUV39H1, KMT5B and KMT5C, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Also acts as a transcription repressor of E2F target genes by recruiting c [...] (984 aa)
RBL1RB transcriptional corepressor like 1. (1050 aa)
HDAC7Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1250 aa)
TBC1D8TBC1 domain family member 8. (1145 aa)
GSK3BGlycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (420 aa)
CDH1Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. E-cadherin is a ligand for integrin alpha- E/beta-7. (887 aa)
PTTG2Uncharacterized protein. (193 aa)
CDC45Cell division cycle 45. (566 aa)
E2F4E2F transcription factor 4. (414 aa)
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (By similarity). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). Histone deacetylases act via the formation of large multiprotein complexes (By similarity). May play a role in the regulation of the circadian clock in a deacetylase activity-independent manner (By similarity). (428 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2660 aa)
E2F1Transcription factor E2F1; Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The DRTF1/E2F complex functions in the control of cell-cycle progression from G1 to S phase. E2F1 binds preferentially RB1 in a cell-cycle dependent manner. It can mediate both cell proliferation and TP53/p53-dependent apoptosis. Blocks adipocyte differentiation by binding to specific promoters repressing CEBPA bindi [...] (403 aa)
CDK1Cyclin-dependent kinase 1; Plays a key role in the control of the eukaryotic cell cycle (By similarity). It is required in higher cells for entry into S-phase and mitosis (By similarity). p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II (By similarity). May play a role in regulating the amplitude of the cyclic expression of circadian clock genes (By similarity). Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (303 aa)
CCND3Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (292 aa)
SKP2F-box domain-containing protein. (520 aa)
ABL1Tyrosine-protein kinase. (1111 aa)
CCNB1G2/mitotic-specific cyclin-B2; Essential for the control of the cell cycle at the G2/M (mitosis) transition. (399 aa)
MAD1L1Mitotic arrest deficient 1 like 1. (717 aa)
CCNE1G1/S-specific cyclin-E1; Essential for the control of the cell cycle at the G1/S (start) transition; Belongs to the cyclin family. Cyclin E subfamily. (407 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B; Adapter protein able to interact with different proteins and involved in different biological processes. Mediates the interaction between the error-prone DNA polymerase zeta catalytic subunit REV3L and the inserter polymerase REV1, thereby mediating the second polymerase switching in translesion DNA synthesis. Translesion DNA synthesis releases the replication blockade of replicative polymerases, stalled in presence of DNA lesions. May also play a role in signal transduction in response to DNA damage. May regulate the activation of the [...] (211 aa)
HDAC8Hist_deacetyl domain-containing protein. (368 aa)
CDC14AUncharacterized protein. (603 aa)
MCM2DNA helicase; Belongs to the MCM family. (929 aa)
CDC7Cell division cycle 7. (564 aa)
PLK1Serine/threonine-protein kinase PLK. (595 aa)
BUB1Uncharacterized protein. (1087 aa)
ORC2Uncharacterized protein. (569 aa)
DBF4DBF4 zinc finger. (709 aa)
CDK6Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (326 aa)
MDM2E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. (483 aa)
CDC20WD_REPEATS_REGION domain-containing protein. (507 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (867 aa)
CCNA2Cyclin-A2; Cyclin which controls both the G1/S and the G2/M transition phases of the cell cycle. Functions through the formation of specific serine/threonine kinase holoenzyme complexes with the cyclin-dependent protein kinases CDK1 and CDK2. The cyclin subunit confers the substrate specificity of these complexes and differentially interacts with and activates CDK1 and CDK2 throughout the cell cycle. (395 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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