Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALYREF | CDC5L | ENSGALP00000011696 | ENSGALP00000065682 | RRM domain-containing protein. | Cell division cycle 5 like. | 0.408 |
| ALYREF | CTNNBL1 | ENSGALP00000011696 | ENSGALP00000011006 | RRM domain-containing protein. | Catenin beta like 1. | 0.405 |
| ALYREF | DDX5 | ENSGALP00000011696 | ENSGALP00000005576 | RRM domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.559 |
| ALYREF | DHX38 | ENSGALP00000011696 | ENSGALP00000037931 | RRM domain-containing protein. | Uncharacterized protein. | 0.410 |
| ALYREF | EFTUD2 | ENSGALP00000011696 | ENSGALP00000064066 | RRM domain-containing protein. | 116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity). | 0.734 |
| ALYREF | EIF4A3 | ENSGALP00000011696 | ENSGALP00000038179 | RRM domain-containing protein. | Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] | 0.990 |
| ALYREF | HNRNPA3 | ENSGALP00000011696 | ENSGALP00000057666 | RRM domain-containing protein. | Heterogeneous nuclear ribonucleoprotein A3. | 0.864 |
| ALYREF | HNRNPK | ENSGALP00000011696 | ENSGALP00000020534 | RRM domain-containing protein. | Heterogeneous nuclear ribonucleoprotein K. | 0.656 |
| ALYREF | HNRNPKL | ENSGALP00000011696 | ENSGALP00000061636 | RRM domain-containing protein. | Heterogeneous nuclear ribonucleoprotein K; One of the major pre-mRNA-binding proteins. Binds tenaciously to poly(C) sequences. Likely to play a role in the nuclear metabolism of hnRNAs, particularly for pre-mRNAs that contain cytidine-rich sequences. Can also bind poly(C) single-stranded DNA. May play an important role in p53/TP53 response to DNA damage, acting at the level of both transcription activation and repression (By similarity). | 0.647 |
| ALYREF | HNRNPM | ENSGALP00000011696 | ENSGALP00000000509 | RRM domain-containing protein. | Uncharacterized protein. | 0.602 |
| ALYREF | LOC422214 | ENSGALP00000011696 | ENSGALP00000009225 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.743 |
| ALYREF | MAGOH | ENSGALP00000011696 | ENSGALP00000061989 | RRM domain-containing protein. | Protein mago nashi homolog; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby infl [...] | 0.937 |
| ALYREF | NCBP1 | ENSGALP00000011696 | ENSGALP00000003250 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense-mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5'-end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U sn [...] | 0.956 |
| ALYREF | NCBP2 | ENSGALP00000011696 | ENSGALP00000011061 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.883 |
| ALYREF | PRPF19 | ENSGALP00000011696 | ENSGALP00000058486 | RRM domain-containing protein. | Pre-mRNA-processing factor 19; Ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. Required for pre-mRNA splicing as component of the spliceosome. Core component of the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome and participates in its assembly, its remodeling and is required for its activity; Belongs to the WD repeat PRP19 family. | 0.725 |
| ALYREF | PRPF4 | ENSGALP00000011696 | ENSGALP00000014372 | RRM domain-containing protein. | Pre-mRNA processing factor 4. | 0.451 |
| ALYREF | RBMXL1 | ENSGALP00000011696 | ENSGALP00000062425 | RRM domain-containing protein. | RRM domain-containing protein. | 0.482 |
| ALYREF | SF3A2 | ENSGALP00000011696 | ENSGALP00000001205 | RRM domain-containing protein. | Splicing factor 3a subunit 2. | 0.438 |
| ALYREF | SNRPC | ENSGALP00000011696 | ENSGALP00000004369 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.537 |
| ALYREF | SNRPD2 | ENSGALP00000011696 | ENSGALP00000070288 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.481 |
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