(57 nodes) Alanine, aspartate and glutamate metabolism network (Pavo cristatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPSTP00000004123	annotation not available (288 aa)
	ENSPSTP00000003651	annotation not available (102 aa)
	ENSPSTP00000007717	annotation not available (517 aa)
	GPR143	G protein-coupled receptor 143. (361 aa)
	ENSPSTP00000002727	annotation not available (503 aa)
	GLUL	Glutamate-ammonia ligase. (373 aa)
	LGSN	Lengsin, lens protein with glutamine synthetase domain. (773 aa)
	ENSPSTP00000008654	annotation not available (287 aa)
	ENSPSTP00000008663	annotation not available (241 aa)
	ENSPSTP00000023301	annotation not available (75 aa)
	PPAT	Phosphoribosyl pyrophosphate amidotransferase. (495 aa)
	ENSPSTP00000000529	annotation not available (541 aa)
	ADSL	Adenylosuccinate lyase. (559 aa)
	ENSPSTP00000002113	annotation not available (497 aa)
	ENSPSTP00000001688	annotation not available (516 aa)
	RIMKLB	Ribosomal modification protein rimK like family member B. (270 aa)
	ENSPSTP00000018613	annotation not available (212 aa)
	TMEM109	Transmembrane protein 109. (257 aa)
	ADSS2	Adenylosuccinate synthase 2. (370 aa)
	ENSPSTP00000017423	annotation not available (381 aa)
	NFU1	NFU1 iron-sulfur cluster scaffold. (218 aa)
	ENSPSTP00000017277	annotation not available (2393 aa)
	ENSPSTP00000017079	annotation not available (67 aa)
	ENSPSTP00000016822	annotation not available (675 aa)
	ENSPSTP00000015037	annotation not available (93 aa)
	NIT2	Nitrilase family member 2. (255 aa)
	TMEM116	Transmembrane protein 116. (297 aa)
	ENSPSTP00000013920	annotation not available (75 aa)
	AGXT2	Alanine--glyoxylate aminotransferase 2. (478 aa)
	ENSPSTP00000011666	annotation not available (212 aa)
	GPT2	Glutamic--pyruvic transaminase 2. (582 aa)
	TASP1	Taspase 1. (354 aa)
	ENSPSTP00000009992	annotation not available (490 aa)
	ENSPSTP00000005730	annotation not available (637 aa)
	GOT2	Glutamic-oxaloacetic transaminase 2. (427 aa)
	ASPA	Aspartoacylase. (292 aa)
	GOT1	Glutamic-oxaloacetic transaminase 1. (412 aa)
	ENSPSTP00000019453	annotation not available (507 aa)
	ENSPSTP00000021585	annotation not available (295 aa)
	CPS1	Carbamoyl-phosphate synthase 1. (1465 aa)
	NAT8L	N-acetyltransferase 8 like. (384 aa)
	ENSPSTP00000022683	annotation not available (546 aa)
	ASS1	Argininosuccinate synthase 1. (347 aa)
	NAALADL2	N-acetylated alpha-linked acidic dipeptidase like 2. (490 aa)
	ALDH5A1	Aldehyde dehydrogenase 5 family member A1. (471 aa)
	ENSPSTP00000003633	annotation not available (169 aa)
	ENSPSTP00000003626	annotation not available (93 aa)
	ENSPSTP00000011654	annotation not available (109 aa)
	GAD2	Glutamate decarboxylase 2. (553 aa)
	ENSPSTP00000010511	annotation not available (241 aa)
	ENSPSTP00000011403	annotation not available (95 aa)
	DDO	D-aspartate oxidase. (342 aa)
	ENSPSTP00000007376	annotation not available (362 aa)
	ENSPSTP00000011059	annotation not available (109 aa)
	ALDH4A1	Aldehyde dehydrogenase 4 family member A1. (434 aa)
	ENSPSTP00000005275	annotation not available (131 aa)
	ENSPSTP00000004128	annotation not available (125 aa)

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADSL	ADSS2	ENSPSTP00000001359	ENSPSTP00000017666	Adenylosuccinate lyase.	Adenylosuccinate synthase 2.	0.941
ADSL	ASS1	ENSPSTP00000001359	ENSPSTP00000023138	Adenylosuccinate lyase.	Argininosuccinate synthase 1.	0.599
ADSL	CPS1	ENSPSTP00000001359	ENSPSTP00000022352	Adenylosuccinate lyase.	Carbamoyl-phosphate synthase 1.	0.607
ADSL	ENSPSTP00000004123	ENSPSTP00000001359	ENSPSTP00000004123	Adenylosuccinate lyase.	annotation not available	0.928
ADSL	ENSPSTP00000004128	ENSPSTP00000001359	ENSPSTP00000004128	Adenylosuccinate lyase.	annotation not available	0.928
ADSL	ENSPSTP00000005730	ENSPSTP00000001359	ENSPSTP00000005730	Adenylosuccinate lyase.	annotation not available	0.481
ADSL	ENSPSTP00000011654	ENSPSTP00000001359	ENSPSTP00000011654	Adenylosuccinate lyase.	annotation not available	0.952
ADSL	ENSPSTP00000011666	ENSPSTP00000001359	ENSPSTP00000011666	Adenylosuccinate lyase.	annotation not available	0.941
ADSL	ENSPSTP00000017277	ENSPSTP00000001359	ENSPSTP00000017277	Adenylosuccinate lyase.	annotation not available	0.607
ADSL	ENSPSTP00000018613	ENSPSTP00000001359	ENSPSTP00000018613	Adenylosuccinate lyase.	annotation not available	0.941
ADSL	GOT1	ENSPSTP00000001359	ENSPSTP00000018660	Adenylosuccinate lyase.	Glutamic-oxaloacetic transaminase 1.	0.406
ADSL	GOT2	ENSPSTP00000001359	ENSPSTP00000025662	Adenylosuccinate lyase.	Glutamic-oxaloacetic transaminase 2.	0.417
ADSL	GPR143	ENSPSTP00000001359	ENSPSTP00000006699	Adenylosuccinate lyase.	G protein-coupled receptor 143.	0.607
ADSL	PPAT	ENSPSTP00000001359	ENSPSTP00000025300	Adenylosuccinate lyase.	Phosphoribosyl pyrophosphate amidotransferase.	0.983
ADSL	TMEM116	ENSPSTP00000001359	ENSPSTP00000014255	Adenylosuccinate lyase.	Transmembrane protein 116.	0.607
ADSS2	ADSL	ENSPSTP00000017666	ENSPSTP00000001359	Adenylosuccinate synthase 2.	Adenylosuccinate lyase.	0.941
ADSS2	ASS1	ENSPSTP00000017666	ENSPSTP00000023138	Adenylosuccinate synthase 2.	Argininosuccinate synthase 1.	0.846
ADSS2	CPS1	ENSPSTP00000017666	ENSPSTP00000022352	Adenylosuccinate synthase 2.	Carbamoyl-phosphate synthase 1.	0.719
ADSS2	ENSPSTP00000000529	ENSPSTP00000017666	ENSPSTP00000000529	Adenylosuccinate synthase 2.	annotation not available	0.480
ADSS2	ENSPSTP00000004123	ENSPSTP00000017666	ENSPSTP00000004123	Adenylosuccinate synthase 2.	annotation not available	0.560