(5 nodes) ESCRT III complex network (Guillardia theta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS20	Vacuolar protein sorting protein 20. (308 aa)
	VPS4	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family. (443 aa)
	L1IGC1_GUITC	Uncharacterized protein. (238 aa)
	VPS32	Vacuolar protein sorting protein 32. (228 aa)
	VPS24	Vacuolar protein sorting protein 24. (225 aa)

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IGC1_GUITC	VPS20	L1IGC1	L1I5P1	Uncharacterized protein.	Vacuolar protein sorting protein 20.	0.948
L1IGC1_GUITC	VPS24	L1IGC1	L1IT11	Uncharacterized protein.	Vacuolar protein sorting protein 24.	0.962
L1IGC1_GUITC	VPS32	L1IGC1	L1IMN0	Uncharacterized protein.	Vacuolar protein sorting protein 32.	0.900
L1IGC1_GUITC	VPS4	L1IGC1	L1IBZ1	Uncharacterized protein.	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	0.955
VPS20	L1IGC1_GUITC	L1I5P1	L1IGC1	Vacuolar protein sorting protein 20.	Uncharacterized protein.	0.948
VPS20	VPS24	L1I5P1	L1IT11	Vacuolar protein sorting protein 20.	Vacuolar protein sorting protein 24.	0.993
VPS20	VPS32	L1I5P1	L1IMN0	Vacuolar protein sorting protein 20.	Vacuolar protein sorting protein 32.	0.990
VPS20	VPS4	L1I5P1	L1IBZ1	Vacuolar protein sorting protein 20.	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	0.999
VPS24	L1IGC1_GUITC	L1IT11	L1IGC1	Vacuolar protein sorting protein 24.	Uncharacterized protein.	0.962
VPS24	VPS20	L1IT11	L1I5P1	Vacuolar protein sorting protein 24.	Vacuolar protein sorting protein 20.	0.993
VPS24	VPS32	L1IT11	L1IMN0	Vacuolar protein sorting protein 24.	Vacuolar protein sorting protein 32.	0.988
VPS24	VPS4	L1IT11	L1IBZ1	Vacuolar protein sorting protein 24.	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	0.965
VPS32	L1IGC1_GUITC	L1IMN0	L1IGC1	Vacuolar protein sorting protein 32.	Uncharacterized protein.	0.900
VPS32	VPS20	L1IMN0	L1I5P1	Vacuolar protein sorting protein 32.	Vacuolar protein sorting protein 20.	0.990
VPS32	VPS24	L1IMN0	L1IT11	Vacuolar protein sorting protein 32.	Vacuolar protein sorting protein 24.	0.988
VPS32	VPS4	L1IMN0	L1IBZ1	Vacuolar protein sorting protein 32.	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	0.954
VPS4	L1IGC1_GUITC	L1IBZ1	L1IGC1	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.955
VPS4	VPS20	L1IBZ1	L1I5P1	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	Vacuolar protein sorting protein 20.	0.999
VPS4	VPS24	L1IBZ1	L1IT11	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	Vacuolar protein sorting protein 24.	0.965
VPS4	VPS32	L1IBZ1	L1IMN0	Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.	Vacuolar protein sorting protein 32.	0.954