(52 nodes) Mixed, incl. Epidermal cell fate specification, and Transferase family network (Dendrobium catenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MYB4	Myb-related protein Myb4. (54 aa)
	5GT	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase. (139 aa)
	5GT-2	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (479 aa)
	5GT-3	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (479 aa)
	5GT-4	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase. (73 aa)
	TT12	Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (497 aa)
	PIN2	Putative auxin efflux carrier component 2. (76 aa)
	SRR1	Protein SENSITIVITY TO RED LIGHT REDUCED 1. (299 aa)
	MYB5	Transcription repressor MYB5. (261 aa)
	MYB4-3	Myb-related protein Myb4. (227 aa)
	PAP2	Purple acid phosphatase 2. (405 aa)
	MA16_Dca012243	Putative GPI-anchored protein. (454 aa)
	TT12-5	Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (497 aa)
	5GT-5	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (473 aa)
	5GT-6	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family. (477 aa)
	5GT-7	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase. (345 aa)
	MYB4-4	Myb-related protein Myb4. (54 aa)
	TT8	Transcription factor TT8. (566 aa)
	CPC-3	Transcription factor CPC. (72 aa)
	MYB4-5	Myb-related protein Myb4. (54 aa)
	3MAT	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (414 aa)
	3MAT-2	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (472 aa)
	WRKY44	WRKY transcription factor 44. (425 aa)
	MYB3	Transcription factor MYB3. (181 aa)
	MA16_Dca002334	AP2/ERF and B3 domain-containing protein. (326 aa)
	MYB5-2	Transcription repressor MYB5. (273 aa)
	TCP15	Transcription factor TCP15. (256 aa)
	TT1-2	Protein TRANSPARENT TESTA 1. (365 aa)
	GL3	Transcription factor GLABRA 3. (522 aa)
	DEGP8	Protease Do-like 8, chloroplastic. (480 aa)
	3MAT-3	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (453 aa)
	3MAT-4	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (457 aa)
	LBD41	LOB domain-containing protein 41. (299 aa)
	MYB4-7	Myb-related protein Myb4. (203 aa)
	M17	MADS-box protein ZMM17. (228 aa)
	MADS29-2	MADS-box transcription factor 29. (220 aa)
	TTG1	Protein TRANSPARENT TESTA GLABRA 1. (401 aa)
	MA16_Dca021721	AP2/ERF and B3 domain-containing protein. (338 aa)
	GL3-2	Transcription factor GLABRA 3. (644 aa)
	SCPL6	Serine carboxypeptidase-like 6; Belongs to the peptidase S10 family. (559 aa)
	C1-3	Anthocyanin regulatory C1 protein. (290 aa)
	C1-4	Anthocyanin regulatory C1 protein. (252 aa)
	MA16_Dca005334	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (317 aa)
	MYB4-10	Myb-related protein Myb4. (54 aa)
	MYB4-11	Myb-related protein Myb4. (235 aa)
	MYB5-3	Transcription repressor MYB5. (264 aa)
	MA16_Dca003335	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (318 aa)
	MYB4-12	Myb-related protein Myb4. (56 aa)
	MYB4-13	Myb-related protein Myb4. (54 aa)
	3MAT-5	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (503 aa)
	3MAT-6	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (453 aa)
	PCMP-E86-5	Pentatricopeptide repeat-containing protein. (585 aa)

Your Current Organism:

Dendrobium catenatum

NCBI taxonomy Id: 906689
Other names: D. catenatum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
3MAT	5GT	A0A2I0VSH3	A0A2I0V9S6	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.	0.576
3MAT	5GT-2	A0A2I0VSH3	A0A2I0VCL1	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.	0.575
3MAT	5GT-3	A0A2I0VSH3	A0A2I0VCL2	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.	0.575
3MAT	5GT-4	A0A2I0VSH3	A0A2I0VCM5	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.	0.576
3MAT	5GT-5	A0A2I0VSH3	A0A2I0VQ98	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.	0.581
3MAT	5GT-6	A0A2I0VSH3	A0A2I0VQL6	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.	0.575
3MAT	5GT-7	A0A2I0VSH3	A0A2I0VQP4	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.	0.575
3MAT	MYB4	A0A2I0VSH3	A0A2I0V8D3	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-10	A0A2I0VSH3	A0A2I0X744	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-11	A0A2I0VSH3	A0A2I0X7N6	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-12	A0A2I0VSH3	A0A2I0XDW6	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-13	A0A2I0VSH3	A0A2I0XES0	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-3	A0A2I0VSH3	A0A2I0VNR3	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-4	A0A2I0VSH3	A0A2I0VRE5	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-5	A0A2I0VSH3	A0A2I0VS23	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB4-7	A0A2I0VSH3	A0A2I0WKR2	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Myb-related protein Myb4.	0.510
3MAT	MYB5	A0A2I0VSH3	A0A2I0VK63	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Transcription repressor MYB5.	0.511
3MAT	MYB5-2	A0A2I0VSH3	A0A2I0W2G2	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Transcription repressor MYB5.	0.511
3MAT	MYB5-3	A0A2I0VSH3	A0A2I0X834	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Transcription repressor MYB5.	0.511
3MAT	PAP2	A0A2I0VSH3	A0A2I0VPZ9	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase.	Purple acid phosphatase 2.	0.516