STRINGSTRING
YDA-9 YDA-9 EDR1 EDR1 MA16_Dca020505 MA16_Dca020505 MA16_Dca016046 MA16_Dca016046 MA16_Dca027538 MA16_Dca027538 YDA-3 YDA-3 FLS FLS SRG1-2 SRG1-2 LBD20 LBD20 MA16_Dca010838 MA16_Dca010838 MA16_Dca016331 MA16_Dca016331 MED18 MED18 YDA-7 YDA-7 MA16_Dca027278 MA16_Dca027278 MA16_Dca004831 MA16_Dca004831 YDA-8 YDA-8 SYD SYD SYD-3 SYD-3 EDR1-6 EDR1-6 YDA-10 YDA-10 Y-1-4 Y-1-4 SRG1-6 SRG1-6 ANS-3 ANS-3 MA16_Dca015183 MA16_Dca015183 YDA-12 YDA-12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YDA-9Mitogen-activated protein kinase kinase kinase YODA. (839 aa)
EDR1Serine/threonine-protein kinase EDR1. (971 aa)
MA16_Dca020505KH domain-containing protein. (521 aa)
MA16_Dca016046Putative acetyltransferase. (450 aa)
MA16_Dca027538Uncharacterized protein. (98 aa)
YDA-3Mitogen-activated protein kinase kinase kinase YODA. (242 aa)
FLSFlavonol synthase/flavanone 3-hydroxylase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (358 aa)
SRG1-2Protein SRG1; Belongs to the iron/ascorbate-dependent oxidoreductase family. (358 aa)
LBD20LOB domain-containing protein 20. (247 aa)
MA16_Dca010838Putative zinc finger protein. (463 aa)
MA16_Dca016331Putative zinc finger protein. (72 aa)
MED18Mediator of RNA polymerase II transcription subunit 18. (217 aa)
YDA-7Mitogen-activated protein kinase kinase kinase YODA. (311 aa)
MA16_Dca027278Putative tyrosine-protein phosphatase. (194 aa)
MA16_Dca004831RuvB-like helicase; Belongs to the RuvB family. (455 aa)
YDA-8Mitogen-activated protein kinase kinase kinase YODA. (239 aa)
SYDChromatin structure-remodeling complex protein SYD. (153 aa)
SYD-3Chromatin structure-remodeling complex protein SYD. (1982 aa)
EDR1-6Serine/threonine-protein kinase EDR1. (988 aa)
YDA-10Mitogen-activated protein kinase kinase kinase YODA. (795 aa)
Y-1-4Zinc_ribbon_12 domain-containing protein. (901 aa)
SRG1-6Protein SRG1; Belongs to the iron/ascorbate-dependent oxidoreductase family. (349 aa)
ANS-3Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (347 aa)
MA16_Dca015183Putative tyrosine-protein phosphatase. (209 aa)
YDA-12Mitogen-activated protein kinase kinase kinase YODA. (654 aa)
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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