6 items (Oidiodendron maius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0C3CY86	Uncharacterized protein. (187 aa)
	A0A0C3H7J4	WD_REPEATS_REGION domain-containing protein. (779 aa)
	A0A0C3H3F4	SAS4 domain-containing protein. (568 aa)
	A0A0C3GUE8	Enhancer of polycomb-like protein. (562 aa)
	A0A0C3HK20	Uncharacterized protein. (290 aa)
	A0A0C3CYS4	Uncharacterized protein. (514 aa)

Your Current Organism:

Oidiodendron maius

NCBI taxonomy Id: 913774
Other names: O. maius Zn, Oidiodendron maius Zn

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3CY86	A0A0C3CYS4	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A0C3CY86	A0A0C3GUE8	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.989
A0A0C3CY86	A0A0C3H3F4	Uncharacterized protein.	SAS4 domain-containing protein.	0.438
A0A0C3CY86	A0A0C3HK20	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A0C3CYS4	A0A0C3CY86	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A0C3CYS4	A0A0C3GUE8	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.970
A0A0C3CYS4	A0A0C3HK20	Uncharacterized protein.	Uncharacterized protein.	0.884
A0A0C3GUE8	A0A0C3CY86	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.989
A0A0C3GUE8	A0A0C3CYS4	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.970
A0A0C3GUE8	A0A0C3HK20	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.986
A0A0C3H3F4	A0A0C3CY86	SAS4 domain-containing protein.	Uncharacterized protein.	0.438
A0A0C3H3F4	A0A0C3HK20	SAS4 domain-containing protein.	Uncharacterized protein.	0.460
A0A0C3HK20	A0A0C3CY86	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A0C3HK20	A0A0C3CYS4	Uncharacterized protein.	Uncharacterized protein.	0.884
A0A0C3HK20	A0A0C3GUE8	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.986
A0A0C3HK20	A0A0C3H3F4	Uncharacterized protein.	SAS4 domain-containing protein.	0.460