(81 nodes) Coated vesicle membrane network (Parus major)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DENND1A	DENN domain-containing protein 1A isoform X2. (1106 aa)
	USO1	General vesicular transport factor p115 isoform X1. (1055 aa)
	ATP6V1F	V-type H+-transporting ATPase subunit F. (119 aa)
	CLBA1	Clathrin binding box of aftiphilin containing 1. (319 aa)
	COPA	Coatomer protein complex subunit alpha. (915 aa)
	ATP6V0A1	V-type proton ATPase 116 kDa subunit a isoform X1. (861 aa)
	AP2M1	AP-2 complex subunit mu isoform X1. (433 aa)
	COPE	Coatomer protein complex subunit epsilon. (222 aa)
	AFTPH	Aftiphilin isoform X1. (984 aa)
	GOSR2	Golgi SNAP receptor complex member 2 isoform X1. (203 aa)
	SREBF2	Sterol regulatory element-binding transcription factor 2. (1116 aa)
	TMED2	Transmembrane emp24 domain-containing protein 2 isoform X2. (201 aa)
	ENSPMJP00000003806	annotation not available (130 aa)
	NECAP1	Adaptin ear-binding coat-associated protein 1/2. (274 aa)
	CLTA	Clathrin light chain A. (244 aa)
	PRR15L	Proline-rich protein 15-like protein isoform X1. (99 aa)
	SEC23B	Protein transport protein Sec23B isoform X1. (802 aa)
	VTI1A	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (224 aa)
	SCAP	Sterol regulatory element-binding protein cleavage-activating protein isoform X1. (1320 aa)
	SEC13	Protein transport protein SEC13. (393 aa)
	PEF1	Peflin isoform X1. (233 aa)
	COPB1	Coatomer subunit beta. (953 aa)
	SEC16A	Protein transport protein Sec16A isoform X1. (2416 aa)
	SEC24D	Protein transport protein Sec24D. (1034 aa)
	AP3B2	AP-3 complex subunit beta-2. (1100 aa)
	ARCN1	Coatomer subunit delta. (499 aa)
	CLTB	Clathrin light chain B. (227 aa)
	KLHL12	Kelch-like protein 12 isoform X1. (578 aa)
	CLINT1	Clathrin interactor 1. (645 aa)
	KDELR3	ER lumen protein-retaining receptor 3. (263 aa)
	MYO6	Unconventional myosin-VI. (1279 aa)
	ATP6V0C	V-type H+-transporting ATPase 16kDa proteolipid subunit. (154 aa)
	SEC31A	Protein transport protein Sec31A isoform X1. (1326 aa)
	SYT11	Synaptotagmin-11. (427 aa)
	NECAP2	Adaptin ear-binding coat-associated protein 1/2. (260 aa)
	SEC24A	Protein transport protein Sec24A isoform X1. (1092 aa)
	AP2A2	AP-2 complex subunit alpha-2 isoform X1. (963 aa)
	SAR1B	GTP-binding protein SAR1b. (197 aa)
	ATP6AP1	V-type H+-transporting ATPase S1 subunit. (458 aa)
	SEC22B	Vesicle-trafficking protein SEC22b isoform X1. (215 aa)
	SEC24B	Protein transport protein Sec24B isoform X1. (1233 aa)
	ATP6V1C1	V-type H+-transporting ATPase subunit C. (382 aa)
	VAMP3	Vesicle-associated membrane protein 3. (115 aa)
	ATP6AP2	Renin receptor. (360 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21. (99 aa)
	AP1S2	AP-1 complex subunit sigma-2 isoform X1. (156 aa)
	ADCY8	Adenylate cyclase 8. (1238 aa)
	AP1G1	AP-1 complex subunit gamma-1 isoform X1. (836 aa)
	SGIP1	SH3GL interacting endocytic adaptor 1. (476 aa)
	RASSF9	Ras association domain-containing protein 9 isoform X1. (440 aa)
	COPG1	Coatomer subunit gamma-1. (874 aa)
	ENSPMJP00000017420	Coatomer subunit gamma-2-like. (124 aa)
	PDCD6	Programmed cell death protein 6 isoform X1. (186 aa)
	STX17	Syntaxin 17. (301 aa)
	VTI1B	Vesicle transport through interaction with t-SNAREs homolog 1B. (232 aa)
	ATP6V1D	V-type H+-transporting ATPase subunit D. (247 aa)
	SAR1A	GTP-binding protein SAR1a. (198 aa)
	SLC18A3	Vesicular acetylcholine transporter. (528 aa)
	SEC24C	Protein transport protein Sec24C isoform X1. (1107 aa)
	DBNL	Drebrin-like protein isoform X1. (411 aa)
	ATP6V1H	V-type proton ATPase subunit H isoform X1. (503 aa)
	DAB2	Disabled homolog 2 isoform X1. (714 aa)
	SEC31B	SEC31 homolog B, COPII coat complex component. (1020 aa)
	AP3B1	AP-3 complex subunit beta-1 isoform X1. (1115 aa)
	TYRP1	5,6-dihydroxyindole-2-carboxylic acid oxidase. (536 aa)
	COPB2	Coatomer subunit beta' isoform X1. (884 aa)
	SEC23A	Protein transport protein Sec23A. (765 aa)
	KDELR2	ER lumen protein-retaining receptor 2. (212 aa)
	AP1S3	Adaptor related protein complex 1 subunit sigma 3. (219 aa)
	CLTCL1	Clathrin heavy chain 2 isoform X1. (1672 aa)
	SREBF1	Sterol regulatory element-binding transcription factor 1. (1122 aa)
	EPN2	Epsin-2 isoform X2. (593 aa)
	EPN3	Epsin-3 isoform X1. (640 aa)
	DIPK2A	Deleted in autism protein 1. (429 aa)
	SEC16B	Protein transport protein Sec16B isoform X1. (1008 aa)
	AP1B1	AP-1 complex subunit beta-1 isoform X1. (958 aa)
	AP2B1	AP-2 complex subunit beta isoform X1. (951 aa)
	TMEM199	Transmembrane protein 199. (236 aa)
	ATP6V0B	V-type proton ATPase 21 kDa proteolipid subunit isoform X1. (204 aa)
	CLTC	Clathrin heavy chain 1 isoform X1. (1682 aa)
	SYNRG	Synergin gamma isoform X1. (1426 aa)

Your Current Organism:

Parus major

NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFTPH	SYNRG	ENSPMJP00000002573	ENSPMJP00000027267	Aftiphilin isoform X1.	Synergin gamma isoform X1.	0.538
AP1B1	AP1G1	ENSPMJP00000025828	ENSPMJP00000015924	AP-1 complex subunit beta-1 isoform X1.	AP-1 complex subunit gamma-1 isoform X1.	0.995
AP1B1	AP1S2	ENSPMJP00000025828	ENSPMJP00000015155	AP-1 complex subunit beta-1 isoform X1.	AP-1 complex subunit sigma-2 isoform X1.	0.980
AP1B1	AP1S3	ENSPMJP00000025828	ENSPMJP00000023270	AP-1 complex subunit beta-1 isoform X1.	Adaptor related protein complex 1 subunit sigma 3.	0.817
AP1B1	AP2A2	ENSPMJP00000025828	ENSPMJP00000012532	AP-1 complex subunit beta-1 isoform X1.	AP-2 complex subunit alpha-2 isoform X1.	0.900
AP1B1	AP2M1	ENSPMJP00000025828	ENSPMJP00000001727	AP-1 complex subunit beta-1 isoform X1.	AP-2 complex subunit mu isoform X1.	0.962
AP1B1	AP3B1	ENSPMJP00000025828	ENSPMJP00000021731	AP-1 complex subunit beta-1 isoform X1.	AP-3 complex subunit beta-1 isoform X1.	0.500
AP1B1	AP3B2	ENSPMJP00000025828	ENSPMJP00000009101	AP-1 complex subunit beta-1 isoform X1.	AP-3 complex subunit beta-2.	0.500
AP1B1	CLINT1	ENSPMJP00000025828	ENSPMJP00000009659	AP-1 complex subunit beta-1 isoform X1.	Clathrin interactor 1.	0.450
AP1B1	CLTA	ENSPMJP00000025828	ENSPMJP00000004315	AP-1 complex subunit beta-1 isoform X1.	Clathrin light chain A.	0.688
AP1B1	CLTB	ENSPMJP00000025828	ENSPMJP00000009489	AP-1 complex subunit beta-1 isoform X1.	Clathrin light chain B.	0.688
AP1B1	CLTC	ENSPMJP00000025828	ENSPMJP00000027215	AP-1 complex subunit beta-1 isoform X1.	Clathrin heavy chain 1 isoform X1.	0.832
AP1B1	CLTCL1	ENSPMJP00000025828	ENSPMJP00000023382	AP-1 complex subunit beta-1 isoform X1.	Clathrin heavy chain 2 isoform X1.	0.832
AP1B1	DAB2	ENSPMJP00000025828	ENSPMJP00000021335	AP-1 complex subunit beta-1 isoform X1.	Disabled homolog 2 isoform X1.	0.537
AP1B1	EPN2	ENSPMJP00000025828	ENSPMJP00000023802	AP-1 complex subunit beta-1 isoform X1.	Epsin-2 isoform X2.	0.634
AP1B1	EPN3	ENSPMJP00000025828	ENSPMJP00000024679	AP-1 complex subunit beta-1 isoform X1.	Epsin-3 isoform X1.	0.657
AP1B1	NECAP1	ENSPMJP00000025828	ENSPMJP00000004189	AP-1 complex subunit beta-1 isoform X1.	Adaptin ear-binding coat-associated protein 1/2.	0.687
AP1B1	NECAP2	ENSPMJP00000025828	ENSPMJP00000012354	AP-1 complex subunit beta-1 isoform X1.	Adaptin ear-binding coat-associated protein 1/2.	0.687
AP1B1	SGIP1	ENSPMJP00000025828	ENSPMJP00000016350	AP-1 complex subunit beta-1 isoform X1.	SH3GL interacting endocytic adaptor 1.	0.614
AP1B1	SYNRG	ENSPMJP00000025828	ENSPMJP00000027267	AP-1 complex subunit beta-1 isoform X1.	Synergin gamma isoform X1.	0.528