(24 nodes) FAD/NAD(P)-binding domain superfamily network (Nitrosomonas marina)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SET45227.1	rubredoxin-NAD+ reductase. (383 aa)
	SET46837.1	Pyridine nucleotide-disulphide oxidoreductase. (1178 aa)
	SET04051.1	Glycine oxidase. (376 aa)
	SET07542.1	Sulfide:quinone oxidoreductase. (535 aa)
	SET07690.1	Choline dehydrogenase. (619 aa)
	mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (630 aa)
	SET58763.1	Glutamate synthase (NADPH/NADH) small chain. (495 aa)
	SET60347.1	NADH dehydrogenase. (385 aa)
	SET61328.1	Dihydrolipoamide dehydrogenase. (602 aa)
	SES94712.1	Glycerol-3-phosphate dehydrogenase. (550 aa)
	SET01653.1	L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (533 aa)
	SET02166.1	Tryptophan halogenase. (322 aa)
	SET38457.1	Selenide, water dikinase. (376 aa)
	SET37853.1	Thioredoxin reductase (NADPH). (317 aa)
	SET36909.1	Sulfide-quinone oxidoreductase. (428 aa)
	SET33854.1	Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (587 aa)
	SET30293.1	Flavin-binding monooxygenase-like. (467 aa)
	SET27167.1	Dihydrolipoamide dehydrogenase. (487 aa)
	SET20836.1	2-octaprenyl-6-methoxyphenol hydroxylase. (390 aa)
	SET20636.1	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (727 aa)
	SET20264.1	Lysine N6-hydroxylase. (427 aa)
	SET20019.1	Hypothetical protein. (393 aa)
	SET14737.1	Dihydrolipoamide dehydrogenase. (473 aa)
	SET14613.1	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. (394 aa)

Your Current Organism:

Nitrosomonas marina

NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SES94712.1	SET07542.1	SAMN05216326_10794	SAMN05216326_11132	Glycerol-3-phosphate dehydrogenase.	Sulfide:quinone oxidoreductase.	0.518
SES94712.1	SET38457.1	SAMN05216326_10794	SAMN05216326_1247	Glycerol-3-phosphate dehydrogenase.	Selenide, water dikinase.	0.420
SES94712.1	SET61328.1	SAMN05216326_10794	SAMN05216326_14416	Glycerol-3-phosphate dehydrogenase.	Dihydrolipoamide dehydrogenase.	0.524
SET01653.1	SET33854.1	SAMN05216326_10962	SAMN05216326_12127	L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.	Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.593
SET01653.1	SET61328.1	SAMN05216326_10962	SAMN05216326_14416	L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.	Dihydrolipoamide dehydrogenase.	0.485
SET02166.1	SET04051.1	SAMN05216326_10980	SAMN05216326_11023	Tryptophan halogenase.	Glycine oxidase.	0.500
SET02166.1	SET14613.1	SAMN05216326_10980	SAMN05216326_11335	Tryptophan halogenase.	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.	0.530
SET02166.1	SET20836.1	SAMN05216326_10980	SAMN05216326_11563	Tryptophan halogenase.	2-octaprenyl-6-methoxyphenol hydroxylase.	0.530
SET04051.1	SET02166.1	SAMN05216326_11023	SAMN05216326_10980	Glycine oxidase.	Tryptophan halogenase.	0.500
SET04051.1	SET07542.1	SAMN05216326_11023	SAMN05216326_11132	Glycine oxidase.	Sulfide:quinone oxidoreductase.	0.983
SET04051.1	SET07690.1	SAMN05216326_11023	SAMN05216326_11138	Glycine oxidase.	Choline dehydrogenase.	0.530
SET04051.1	SET14613.1	SAMN05216326_11023	SAMN05216326_11335	Glycine oxidase.	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.	0.576
SET04051.1	SET14737.1	SAMN05216326_11023	SAMN05216326_11340	Glycine oxidase.	Dihydrolipoamide dehydrogenase.	0.539
SET04051.1	SET20636.1	SAMN05216326_11023	SAMN05216326_11555	Glycine oxidase.	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.564
SET04051.1	SET20836.1	SAMN05216326_11023	SAMN05216326_11563	Glycine oxidase.	2-octaprenyl-6-methoxyphenol hydroxylase.	0.603
SET04051.1	SET27167.1	SAMN05216326_11023	SAMN05216326_11833	Glycine oxidase.	Dihydrolipoamide dehydrogenase.	0.539
SET04051.1	SET33854.1	SAMN05216326_11023	SAMN05216326_12127	Glycine oxidase.	Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.573
SET04051.1	SET37853.1	SAMN05216326_11023	SAMN05216326_12362	Glycine oxidase.	Thioredoxin reductase (NADPH).	0.595
SET04051.1	SET45227.1	SAMN05216326_11023	SAMN05216326_1286	Glycine oxidase.	rubredoxin-NAD+ reductase.	0.502
SET04051.1	SET46837.1	SAMN05216326_11023	SAMN05216326_12918	Glycine oxidase.	Pyridine nucleotide-disulphide oxidoreductase.	0.483