54 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_11932	SnoaL-like domain-containing protein. (157 aa)
	PV08_09043	Uncharacterized protein. (124 aa)
	PV08_08133	Uncharacterized protein. (313 aa)
	PV08_06473	Uncharacterized protein. (665 aa)
	PV08_03824	Uncharacterized protein. (435 aa)
	PV08_02293	GH16 domain-containing protein. (385 aa)
	PV08_02784	Uncharacterized protein. (462 aa)
	PV08_11788	Uncharacterized protein. (252 aa)
	PV08_09564	PG_binding_1 domain-containing protein. (825 aa)
	PV08_06683	Protein kinase domain-containing protein. (309 aa)
	PV08_07119	Uncharacterized protein. (1560 aa)
	PV08_07174	Uncharacterized protein. (139 aa)
	PV08_06495	D-ser_dehydrat domain-containing protein. (449 aa)
	PV08_03860	Uncharacterized protein. (222 aa)
	PV08_04188	Uncharacterized protein. (739 aa)
	PV08_03317	TRP_N domain-containing protein. (1123 aa)
	PV08_03521	Peptidase_M14 domain-containing protein. (574 aa)
	PV08_00135	Uncharacterized protein. (594 aa)
	PV08_00331	Uncharacterized protein. (320 aa)
	PV08_00937	Uncharacterized protein. (1212 aa)
	PV08_12090	EST1_DNA_bind domain-containing protein. (741 aa)
	PV08_11681	Zn(2)-C6 fungal-type domain-containing protein. (616 aa)
	PV08_10698	Uncharacterized protein. (435 aa)
	PV08_10675	Peptidase S53 domain-containing protein. (633 aa)
	PV08_09966	FAD-binding FR-type domain-containing protein. (625 aa)
	PV08_07946	Uncharacterized protein. (563 aa)
	PV08_06643	Peptidase S53 domain-containing protein. (612 aa)
	PV08_06615	Uncharacterized protein. (587 aa)
	PV08_07208	FAD-binding FR-type domain-containing protein. (701 aa)
	PV08_05278	Uncharacterized protein. (124 aa)
	PV08_07807	CFEM domain-containing protein. (315 aa)
	PV08_05953	DUF5353 domain-containing protein. (171 aa)
	PV08_06204	Uncharacterized protein. (628 aa)
	PV08_05975	Phytase-like domain-containing protein. (520 aa)
	PV08_06496	Uncharacterized protein. (1010 aa)
	PV08_06226	Uncharacterized protein. (994 aa)
	PV08_06578	Uncharacterized protein. (191 aa)
	PV08_11710	Uncharacterized protein. (608 aa)
	PV08_11231	Uncharacterized protein. (236 aa)
	PV08_02578	Uncharacterized protein. (263 aa)
	PV08_02992	Uncharacterized protein. (369 aa)
	PV08_03372	Uncharacterized protein. (1367 aa)
	PV08_09076	Uncharacterized protein. (271 aa)
	PV08_00247	ACT_3 domain-containing protein. (148 aa)
	PV08_00274	P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (857 aa)
	PV08_08687	Uncharacterized protein. (551 aa)
	PV08_02183	Uncharacterized protein. (553 aa)
	PV08_07243	Uncharacterized protein. (2087 aa)
	PV08_07313	Uncharacterized protein. (1273 aa)
	PV08_05214	Uncharacterized protein. (117 aa)
	PV08_06538	Uncharacterized protein. (378 aa)
	PV08_04485	TRP_N domain-containing protein. (916 aa)
	PV08_02582	Peptidase_M43 domain-containing protein. (171 aa)
	PV08_01824	MHYT domain-containing protein. (847 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00135	PV08_00247	A0A0D2A3Z0	A0A0D2BL37	Uncharacterized protein.	ACT_3 domain-containing protein.	0.481
PV08_00135	PV08_00274	A0A0D2A3Z0	A0A0D2BM70	Uncharacterized protein.	P/Homo B domain-containing protein; Belongs to the peptidase S8 family.	0.450
PV08_00135	PV08_01824	A0A0D2A3Z0	A0A0D2CCL7	Uncharacterized protein.	MHYT domain-containing protein.	0.718
PV08_00135	PV08_02183	A0A0D2A3Z0	A0A0D2BRC8	Uncharacterized protein.	Uncharacterized protein.	0.412
PV08_00135	PV08_02293	A0A0D2A3Z0	A0A0D1YS29	Uncharacterized protein.	GH16 domain-containing protein.	0.538
PV08_00135	PV08_03521	A0A0D2A3Z0	A0A0D2A2Q5	Uncharacterized protein.	Peptidase_M14 domain-containing protein.	0.515
PV08_00135	PV08_03824	A0A0D2A3Z0	A0A0D1YNH3	Uncharacterized protein.	Uncharacterized protein.	0.538
PV08_00135	PV08_05214	A0A0D2A3Z0	A0A0D2BV86	Uncharacterized protein.	Uncharacterized protein.	0.481
PV08_00135	PV08_05975	A0A0D2A3Z0	A0A0D2BBF4	Uncharacterized protein.	Phytase-like domain-containing protein.	0.515
PV08_00135	PV08_06226	A0A0D2A3Z0	A0A0D2BC21	Uncharacterized protein.	Uncharacterized protein.	0.412
PV08_00135	PV08_06578	A0A0D2A3Z0	A0A0D2BC44	Uncharacterized protein.	Uncharacterized protein.	0.481
PV08_00135	PV08_07174	A0A0D2A3Z0	A0A0D1ZNH8	Uncharacterized protein.	Uncharacterized protein.	0.412
PV08_00135	PV08_07208	A0A0D2A3Z0	A0A0D2B6X3	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.412
PV08_00135	PV08_07807	A0A0D2A3Z0	A0A0D2B8Q7	Uncharacterized protein.	CFEM domain-containing protein.	0.464
PV08_00135	PV08_07946	A0A0D2A3Z0	A0A0D2B2B4	Uncharacterized protein.	Uncharacterized protein.	0.412
PV08_00135	PV08_09043	A0A0D2A3Z0	A0A0D1Y9Y4	Uncharacterized protein.	Uncharacterized protein.	0.481
PV08_00135	PV08_09966	A0A0D2A3Z0	A0A0D2B193	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.412
PV08_00135	PV08_11681	A0A0D2A3Z0	A0A0D2ATS3	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.455
PV08_00135	PV08_11710	A0A0D2A3Z0	A0A0D2BF00	Uncharacterized protein.	Uncharacterized protein.	0.702
PV08_00247	PV08_00135	A0A0D2BL37	A0A0D2A3Z0	ACT_3 domain-containing protein.	Uncharacterized protein.	0.481