STRINGSTRING
PV08_06657 PV08_06657 PV08_04136 PV08_04136 PV08_00617 PV08_00617 PV08_11404 PV08_11404 PV08_10124 PV08_10124 PV08_09906 PV08_09906 PV08_07273 PV08_07273
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_06657CBF domain-containing protein. (287 aa)
PV08_04136Uncharacterized protein. (900 aa)
PV08_00617Ribosomal RNA small subunit methyltransferase NEP1. (256 aa)
PV08_11404WD_REPEATS_REGION domain-containing protein. (443 aa)
PV08_10124DRIM domain-containing protein. (2590 aa)
PV08_09906U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (290 aa)
PV08_07273WD_REPEATS_REGION domain-containing protein. (557 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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