11 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_06432	TFIIE beta domain-containing protein. (231 aa)
	PV08_01525	Uncharacterized protein. (505 aa)
	PV08_10537	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
	PV08_06873	BSD domain-containing protein. (630 aa)
	PV08_09645	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (423 aa)
	PV08_09592	RING-type domain-containing protein. (265 aa)
	PV08_06284	HTH TFE/IIEalpha-type domain-containing protein. (514 aa)
	PV08_03909	CYCLIN domain-containing protein; Belongs to the cyclin family. (376 aa)
	PV08_02372	Uncharacterized protein. (843 aa)
	PV08_02977	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (459 aa)
	PV08_00060	DNA repair helicase rad15. (816 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00060	PV08_01525	A0A0D2BKM9	A0A0D1Z066	DNA repair helicase rad15.	Uncharacterized protein.	0.999
PV08_00060	PV08_02372	A0A0D2BKM9	A0A0D2BHK3	DNA repair helicase rad15.	Uncharacterized protein.	0.999
PV08_00060	PV08_02977	A0A0D2BKM9	A0A0D2BI97	DNA repair helicase rad15.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
PV08_00060	PV08_03909	A0A0D2BKM9	A0A0D2BDL9	DNA repair helicase rad15.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.992
PV08_00060	PV08_06284	A0A0D2BKM9	A0A0D2BB46	DNA repair helicase rad15.	HTH TFE/IIEalpha-type domain-containing protein.	0.994
PV08_00060	PV08_06432	A0A0D2BKM9	A0A0D1YMV7	DNA repair helicase rad15.	TFIIE beta domain-containing protein.	0.994
PV08_00060	PV08_06873	A0A0D2BKM9	A0A0D1ZMP8	DNA repair helicase rad15.	BSD domain-containing protein.	0.999
PV08_00060	PV08_09592	A0A0D2BKM9	A0A0D2B0T5	DNA repair helicase rad15.	RING-type domain-containing protein.	0.999
PV08_00060	PV08_09645	A0A0D2BKM9	A0A0D2B079	DNA repair helicase rad15.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.991
PV08_00060	PV08_10537	A0A0D2BKM9	A0A0D1ZE00	DNA repair helicase rad15.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
PV08_01525	PV08_00060	A0A0D1Z066	A0A0D2BKM9	Uncharacterized protein.	DNA repair helicase rad15.	0.999
PV08_01525	PV08_02372	A0A0D1Z066	A0A0D2BHK3	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01525	PV08_02977	A0A0D1Z066	A0A0D2BI97	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
PV08_01525	PV08_03909	A0A0D1Z066	A0A0D2BDL9	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.996
PV08_01525	PV08_06284	A0A0D1Z066	A0A0D2BB46	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.994
PV08_01525	PV08_06432	A0A0D1Z066	A0A0D1YMV7	Uncharacterized protein.	TFIIE beta domain-containing protein.	0.993
PV08_01525	PV08_06873	A0A0D1Z066	A0A0D1ZMP8	Uncharacterized protein.	BSD domain-containing protein.	0.999
PV08_01525	PV08_09592	A0A0D1Z066	A0A0D2B0T5	Uncharacterized protein.	RING-type domain-containing protein.	0.997
PV08_01525	PV08_09645	A0A0D1Z066	A0A0D2B079	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.996
PV08_01525	PV08_10537	A0A0D1Z066	A0A0D1ZE00	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999