51 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_12027	Chromo domain-containing protein. (251 aa)
	PV08_00742	Uncharacterized protein. (688 aa)
	PV08_04626	Uncharacterized protein. (824 aa)
	PV08_06484	DUF1752 domain-containing protein. (545 aa)
	PV08_06627	Uncharacterized protein. (1133 aa)
	PV08_08264	Uncharacterized protein. (435 aa)
	PV08_11209	WD_REPEATS_REGION domain-containing protein. (624 aa)
	PV08_02246	Uncharacterized protein. (235 aa)
	PV08_00921	Thioredoxin-like_fold domain-containing protein. (210 aa)
	PV08_02879	SANT domain-containing protein. (797 aa)
	PV08_04821	zf-LYAR domain-containing protein. (530 aa)
	PV08_06478	Non-specific serine/threonine protein kinase. (872 aa)
	PV08_07255	3-dehydroquinate dehydratase, type I. (820 aa)
	PV08_06782	GFO_IDH_MocA domain-containing protein. (375 aa)
	PV08_06591	Chromo domain-containing protein. (186 aa)
	PV08_09979	GFO_IDH_MocA domain-containing protein. (363 aa)
	PV08_00915	Uncharacterized protein. (476 aa)
	PV08_01113	Non-specific serine/threonine protein kinase. (874 aa)
	PV08_00928	UV excision repair protein Rad23. (839 aa)
	PV08_00925	Uncharacterized protein. (453 aa)
	PV08_08116	Deacetylase sirtuin-type domain-containing protein. (533 aa)
	PV08_01723	Uncharacterized protein. (1512 aa)
	PV08_01368	R3H domain-containing protein. (486 aa)
	PV08_01433	FAS1 domain-containing protein. (239 aa)
	PV08_06850	GFO_IDH_MocA domain-containing protein. (369 aa)
	PV08_07428	WD_REPEATS_REGION domain-containing protein. (537 aa)
	PV08_05794	Uncharacterized protein. (674 aa)
	PV08_06435	Deacetylase sirtuin-type domain-containing protein. (605 aa)
	PV08_03913	WD_REPEATS_REGION domain-containing protein. (338 aa)
	PV08_03008	HDAC_interact domain-containing protein. (1515 aa)
	PV08_03048	Rtt106 domain-containing protein. (519 aa)
	PV08_02114	WD_REPEATS_REGION domain-containing protein. (185 aa)
	PV08_00535	Uncharacterized protein. (664 aa)
	PV08_09152	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (818 aa)
	PV08_03290	Hist_deacetyl domain-containing protein. (367 aa)
	PV08_03527	CBFD_NFYB_HMF domain-containing protein. (327 aa)
	PV08_03072	Deacetylase sirtuin-type domain-containing protein. (617 aa)
	PV08_03042	HMG box domain-containing protein. (471 aa)
	PV08_10218	WD_REPEATS_REGION domain-containing protein. (782 aa)
	PV08_04020	CBFD_NFYB_HMF domain-containing protein. (159 aa)
	PV08_06482	Chromo domain-containing protein. (251 aa)
	PV08_07855	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1056 aa)
	PV08_06801	TPR_REGION domain-containing protein. (800 aa)
	PV08_06954	Protein GZF3. (279 aa)
	PV08_09539	Chromo domain-containing protein. (1113 aa)
	PV08_10937	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
	PV08_10718	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (697 aa)
	PV08_10374	Plus3 domain-containing protein. (611 aa)
	PV08_10392	Uncharacterized protein. (1056 aa)
	PV08_12104	Deacetylase sirtuin-type domain-containing protein. (427 aa)
	PV08_11853	Chromo domain-containing protein. (251 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00535	PV08_00915	A0A0D2BN27	A0A0D2BP87	Uncharacterized protein.	Uncharacterized protein.	0.447
PV08_00535	PV08_01433	A0A0D2BN27	A0A0D2BQW3	Uncharacterized protein.	FAS1 domain-containing protein.	0.588
PV08_00535	PV08_03008	A0A0D2BN27	A0A0D2C545	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.588
PV08_00742	PV08_01113	A0A0D2A5W1	A0A0D2BNS3	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.495
PV08_00742	PV08_01723	A0A0D2A5W1	A0A0D2BQB6	Uncharacterized protein.	Uncharacterized protein.	0.575
PV08_00742	PV08_02114	A0A0D2A5W1	A0A0D2CDE7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.421
PV08_00742	PV08_06478	A0A0D2A5W1	A0A0D1YN02	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.495
PV08_00742	PV08_08264	A0A0D2A5W1	A0A0D1ZJU2	Uncharacterized protein.	Uncharacterized protein.	0.404
PV08_00742	PV08_10218	A0A0D2A5W1	A0A0D2BHR5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.421
PV08_00742	PV08_11209	A0A0D2A5W1	A0A0D1ZB46	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.421
PV08_00915	PV08_00535	A0A0D2BP87	A0A0D2BN27	Uncharacterized protein.	Uncharacterized protein.	0.447
PV08_00915	PV08_00921	A0A0D2BP87	A0A0D1YYI1	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.841
PV08_00915	PV08_00925	A0A0D2BP87	A0A0D2BPA3	Uncharacterized protein.	Uncharacterized protein.	0.841
PV08_00915	PV08_01433	A0A0D2BP87	A0A0D2BQW3	Uncharacterized protein.	FAS1 domain-containing protein.	0.841
PV08_00915	PV08_03008	A0A0D2BP87	A0A0D2C545	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.841
PV08_00915	PV08_03290	A0A0D2BP87	A0A0D2BKD0	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.876
PV08_00915	PV08_09152	A0A0D2BP87	A0A0D2BKW0	Uncharacterized protein.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.876
PV08_00915	PV08_10718	A0A0D2BP87	A0A0D2AXI3	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.490
PV08_00921	PV08_00915	A0A0D1YYI1	A0A0D2BP87	Thioredoxin-like_fold domain-containing protein.	Uncharacterized protein.	0.841
PV08_00921	PV08_03290	A0A0D1YYI1	A0A0D2BKD0	Thioredoxin-like_fold domain-containing protein.	Hist_deacetyl domain-containing protein.	0.784