23 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_07652	Uncharacterized protein. (678 aa)
	PV08_08289	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (349 aa)
	PV08_08159	Uncharacterized protein. (420 aa)
	PV08_07666	Uncharacterized protein. (806 aa)
	PV08_08055	Uncharacterized protein. (721 aa)
	PV08_00064	Uncharacterized protein. (226 aa)
	PV08_03191	Uncharacterized protein. (820 aa)
	PV08_08787	DOC domain-containing protein. (363 aa)
	PV08_07563	Uncharacterized protein. (1082 aa)
	PV08_05641	CULLIN_2 domain-containing protein; Belongs to the cullin family. (734 aa)
	PV08_02335	TPR_REGION domain-containing protein. (775 aa)
	PV08_08855	ANK_REP_REGION domain-containing protein. (517 aa)
	PV08_02033	Uncharacterized protein. (204 aa)
	PV08_06745	WD_REPEATS_REGION domain-containing protein. (643 aa)
	PV08_06930	TPR_REGION domain-containing protein. (770 aa)
	PV08_01990	RING-type domain-containing protein. (456 aa)
	PV08_07846	Uncharacterized protein. (1996 aa)
	PV08_01330	Uncharacterized protein. (274 aa)
	PV08_11154	WD_REPEATS_REGION domain-containing protein. (580 aa)
	PV08_06009	Uncharacterized protein. (679 aa)
	PV08_03949	Uncharacterized protein. (115 aa)
	PV08_01625	CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
	PV08_03454	WD_REPEATS_REGION domain-containing protein. (611 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00064	PV08_02033	A0A0D2A3P9	A0A0D2BR28	Uncharacterized protein.	Uncharacterized protein.	0.450
PV08_00064	PV08_03191	A0A0D2A3P9	A0A0D2A1T2	Uncharacterized protein.	Uncharacterized protein.	0.897
PV08_01330	PV08_02335	A0A0D2A7J2	A0A0D2BGF2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
PV08_01330	PV08_03191	A0A0D2A7J2	A0A0D2A1T2	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01330	PV08_03454	A0A0D2A7J2	A0A0D1YV46	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.907
PV08_01330	PV08_05641	A0A0D2A7J2	A0A0D2B9H5	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
PV08_01330	PV08_06745	A0A0D2A7J2	A0A0D2BRX2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.907
PV08_01330	PV08_06930	A0A0D2A7J2	A0A0D2BSD8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
PV08_01330	PV08_07666	A0A0D2A7J2	A0A0D1YIW4	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01330	PV08_07846	A0A0D2A7J2	A0A0D2BV14	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01330	PV08_08055	A0A0D2A7J2	A0A0D2B1R2	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01330	PV08_08289	A0A0D2A7J2	A0A0D1ZJV9	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.987
PV08_01330	PV08_08787	A0A0D2A7J2	A0A0D2B3W4	Uncharacterized protein.	DOC domain-containing protein.	0.999
PV08_01330	PV08_11154	A0A0D2A7J2	A0A0D2ATX5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.907
PV08_01625	PV08_07666	A0A0D1Z0F0	A0A0D1YIW4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.411
PV08_01625	PV08_08289	A0A0D1Z0F0	A0A0D1ZJV9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.573
PV08_01990	PV08_08289	A0A0D2BSK4	A0A0D1ZJV9	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.590
PV08_02033	PV08_00064	A0A0D2BR28	A0A0D2A3P9	Uncharacterized protein.	Uncharacterized protein.	0.450
PV08_02033	PV08_02335	A0A0D2BR28	A0A0D2BGF2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.585
PV08_02033	PV08_03191	A0A0D2BR28	A0A0D2A1T2	Uncharacterized protein.	Uncharacterized protein.	0.931