8 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01688	Uncharacterized protein. (360 aa)
	PV08_07117	Uncharacterized protein. (268 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (175 aa)
	PV08_11207	Uncharacterized protein. (842 aa)
	PV08_07627	Nuclear cap-binding protein subunit 2. (180 aa)
	PV08_00976	Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (1073 aa)
	PV08_04979	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (226 aa)
	PV08_01730	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (183 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	PV08_04979	A0A0D2B6L3	A0A0D2C2A3	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.534
PV08_01730	PV08_04979	A0A0D2BRW1	A0A0D2C2A3	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.596
PV08_04979	LSM1	A0A0D2C2A3	A0A0D2B6L3	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.534
PV08_04979	PV08_01730	A0A0D2C2A3	A0A0D2BRW1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.596
PV08_04979	PV08_07117	A0A0D2C2A3	A0A0D2B6M3	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.534
PV08_04979	PV08_07627	A0A0D2C2A3	A0A0D1ZPU7	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.696
PV08_04979	PV08_11207	A0A0D2C2A3	A0A0D2AUR0	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.879
PV08_07117	PV08_04979	A0A0D2B6M3	A0A0D2C2A3	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.534
PV08_07627	PV08_04979	A0A0D1ZPU7	A0A0D2C2A3	Nuclear cap-binding protein subunit 2.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.696
PV08_07627	PV08_11207	A0A0D1ZPU7	A0A0D2AUR0	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.999
PV08_11207	PV08_04979	A0A0D2AUR0	A0A0D2C2A3	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.879
PV08_11207	PV08_07627	A0A0D2AUR0	A0A0D1ZPU7	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.999