STRINGSTRING
PV08_03499 PV08_03499 PV08_00388 PV08_00388 PV08_07564 PV08_07564 PV08_07826 PV08_07826 PV08_04405 PV08_04405 PV08_01009 PV08_01009 PV08_10963 PV08_10963 PV08_09598 PV08_09598 PV08_11329 PV08_11329 PV08_06173 PV08_06173 PV08_10084 PV08_10084 PV08_08105 PV08_08105 PV08_07658 PV08_07658 PV08_07825 PV08_07825
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_03499Uncharacterized protein. (1306 aa)
PV08_00388DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (457 aa)
PV08_07564HORMA domain-containing protein. (440 aa)
PV08_07826Uncharacterized protein. (362 aa)
PV08_04405Checkpoint protein; Belongs to the HUS1 family. (348 aa)
PV08_01009H15 domain-containing protein. (297 aa)
PV08_10963Uncharacterized protein. (245 aa)
PV08_09598Uncharacterized protein. (531 aa)
PV08_11329DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)
PV08_06173Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
PV08_10084Uncharacterized protein. (615 aa)
PV08_08105Ubiquitin-like domain-containing protein. (101 aa)
PV08_07658Structural maintenance of chromosomes protein. (1206 aa)
PV08_07825Uncharacterized protein. (77 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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