22 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01340	RNA_pol_L_2 domain-containing protein. (243 aa)
	PV08_05708	BRCT domain-containing protein. (773 aa)
	PV08_00668	RPOLD domain-containing protein. (373 aa)
	PV08_09062	RPOLD domain-containing protein. (334 aa)
	PV08_09898	Uncharacterized protein. (238 aa)
	PV08_05815	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1213 aa)
	PV08_04244	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (503 aa)
	PV08_11001	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (86 aa)
	PV08_02592	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1224 aa)
	PV08_08398	Uncharacterized protein. (74 aa)
	PV08_04513	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV08_03341	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1294 aa)
	PV08_00265	DNA-directed RNA polymerase. (193 aa)
	PV08_10742	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (526 aa)
	PV08_10959	Uncharacterized protein. (441 aa)
	PV08_03302	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1772 aa)
	PV08_11607	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1739 aa)
	PV08_01933	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1423 aa)
	PV08_00705	Uncharacterized protein. (152 aa)
	PV08_10292	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1561 aa)
	PV08_10985	Uncharacterized protein. (451 aa)
	PV08_01934	Uncharacterized protein. (408 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00265	PV08_00668	A0A0D1YWL0	A0A0D2BMD8	DNA-directed RNA polymerase.	RPOLD domain-containing protein.	0.996
PV08_00265	PV08_00705	A0A0D1YWL0	A0A0D2BNM3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_01340	A0A0D1YWL0	A0A0D2A7J8	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.483
PV08_00265	PV08_01934	A0A0D1YWL0	A0A0D2CCX3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_02592	A0A0D1YWL0	A0A0D2C3T5	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
PV08_00265	PV08_03341	A0A0D1YWL0	A0A0D1YUW7	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.959
PV08_00265	PV08_04513	A0A0D1YWL0	A0A0D1YQ14	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.998
PV08_00265	PV08_05815	A0A0D1YWL0	A0A0D2BAY4	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
PV08_00265	PV08_08398	A0A0D1YWL0	A0A0D1YDS8	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV08_00265	PV08_09062	A0A0D1YWL0	A0A0D2AZ98	DNA-directed RNA polymerase.	RPOLD domain-containing protein.	0.977
PV08_00265	PV08_09898	A0A0D1YWL0	A0A0D2B1Z3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV08_00265	PV08_10292	A0A0D1YWL0	A0A0D2AW96	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
PV08_00265	PV08_10959	A0A0D1YWL0	A0A0D1ZF82	DNA-directed RNA polymerase.	Uncharacterized protein.	0.589
PV08_00265	PV08_10985	A0A0D1YWL0	A0A0D2AY94	DNA-directed RNA polymerase.	Uncharacterized protein.	0.998
PV08_00265	PV08_11001	A0A0D1YWL0	A0A0D2BK91	DNA-directed RNA polymerase.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.996
PV08_00265	PV08_11607	A0A0D1YWL0	A0A0D2AV95	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
PV08_00668	PV08_00265	A0A0D2BMD8	A0A0D1YWL0	RPOLD domain-containing protein.	DNA-directed RNA polymerase.	0.996
PV08_00668	PV08_00705	A0A0D2BMD8	A0A0D2BNM3	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
PV08_00668	PV08_01340	A0A0D2BMD8	A0A0D2A7J8	RPOLD domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.979
PV08_00668	PV08_01934	A0A0D2BMD8	A0A0D2CCX3	RPOLD domain-containing protein.	Uncharacterized protein.	0.997