36 items (Exophiala spinifera) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	PV08_01625	CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
	PV08_01600	DNA polymerase. (1107 aa)
	PV08_01525	Uncharacterized protein. (505 aa)
	PV08_04921	Uncharacterized protein. (621 aa)
	PV08_00928	UV excision repair protein Rad23. (839 aa)
	PV08_01950	DNA repair protein. (360 aa)
	PV08_04305	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	PV08_04405	Checkpoint protein; Belongs to the HUS1 family. (348 aa)
	PV08_04780	Uncharacterized protein. (1338 aa)
	PV08_04770	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
	PV08_05898	Uncharacterized protein. (723 aa)
	PV08_07500	Uncharacterized protein. (1046 aa)
	PV08_07325	DNA ligase. (866 aa)
	PV08_08038	UV damage endonuclease UvdE. (779 aa)
	PV08_09462	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2235 aa)
	PV08_11525	CUE domain-containing protein. (860 aa)
	PV08_11283	ERCC4 domain-containing protein. (944 aa)
	PV08_05798	ENDO3c domain-containing protein. (411 aa)
	PV08_02977	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (459 aa)
	PV08_02372	Uncharacterized protein. (843 aa)
	PV08_04920	Uncharacterized protein. (943 aa)
	NTH1	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (422 aa)
	PV08_08889	Uncharacterized protein. (1156 aa)
	PV08_08227	Uncharacterized protein. (378 aa)
	PV08_09592	RING-type domain-containing protein. (265 aa)
	PV08_09131	RRM domain-containing protein. (252 aa)
	PV08_10374	Plus3 domain-containing protein. (611 aa)
	PV08_00832	Uncharacterized protein. (1194 aa)
	PV08_01972	Uncharacterized protein. (275 aa)
	PV08_05002	WD_REPEATS_REGION domain-containing protein. (508 aa)
	PV08_06173	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	PV08_03027	Uncharacterized protein. (1047 aa)
	PV08_03345	Uncharacterized protein. (1110 aa)
	PV08_00060	DNA repair helicase rad15. (816 aa)
	PV08_06873	BSD domain-containing protein. (630 aa)
	PV08_10537	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NTH1	PV08_00060	A0A0D2B4Q2	A0A0D2BKM9	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA repair helicase rad15.	0.452
NTH1	PV08_00832	A0A0D2B4Q2	A0A0D2A640	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.480
NTH1	PV08_00928	A0A0D2B4Q2	A0A0D2BN39	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	UV excision repair protein Rad23.	0.414
NTH1	PV08_01600	A0A0D2B4Q2	A0A0D1Z0D9	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA polymerase.	0.543
NTH1	PV08_01950	A0A0D2B4Q2	A0A0D2BSG4	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA repair protein.	0.586
NTH1	PV08_02372	A0A0D2B4Q2	A0A0D2BHK3	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.438
NTH1	PV08_03345	A0A0D2B4Q2	A0A0D2BKH4	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.467
NTH1	PV08_04780	A0A0D2B4Q2	A0A0D2BG53	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.669
NTH1	PV08_05798	A0A0D2B4Q2	A0A0D2B9T0	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	ENDO3c domain-containing protein.	0.668
NTH1	PV08_08227	A0A0D2B4Q2	A0A0D2B375	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.487
NTH1	PV08_09462	A0A0D2B4Q2	A0A0D1YB82	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.490
NTH1	PV08_11283	A0A0D2B4Q2	A0A0D1Y5Y9	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	ERCC4 domain-containing protein.	0.639
PV08_00060	NTH1	A0A0D2BKM9	A0A0D2B4Q2	DNA repair helicase rad15.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.452
PV08_00060	PV08_00832	A0A0D2BKM9	A0A0D2A640	DNA repair helicase rad15.	Uncharacterized protein.	0.817
PV08_00060	PV08_00928	A0A0D2BKM9	A0A0D2BN39	DNA repair helicase rad15.	UV excision repair protein Rad23.	0.831
PV08_00060	PV08_01525	A0A0D2BKM9	A0A0D1Z066	DNA repair helicase rad15.	Uncharacterized protein.	0.999
PV08_00060	PV08_01600	A0A0D2BKM9	A0A0D1Z0D9	DNA repair helicase rad15.	DNA polymerase.	0.811
PV08_00060	PV08_01625	A0A0D2BKM9	A0A0D1Z0F0	DNA repair helicase rad15.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.748
PV08_00060	PV08_01950	A0A0D2BKM9	A0A0D2BSG4	DNA repair helicase rad15.	DNA repair protein.	0.980
PV08_00060	PV08_01972	A0A0D2BKM9	A0A0D2A9E5	DNA repair helicase rad15.	Uncharacterized protein.	0.747