17 items (Exophiala spinifera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	PV08_04922	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1093 aa)
	PV08_02267	Helicase ATP-binding domain-containing protein. (1253 aa)
	PV08_08227	Uncharacterized protein. (378 aa)
	PV08_07322	Uncharacterized protein. (1513 aa)
	PV08_03499	Uncharacterized protein. (1306 aa)
	PV08_01079	Uncharacterized protein. (1666 aa)
	PV08_06173	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	PV08_06027	Uncharacterized protein. (878 aa)
	KAE1	tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. KAE1 likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. The EKC/KEOPS complex also promotes both telomere uncapping and telomere elongation. Th [...] (343 aa)
	PV08_08818	RECA_2 domain-containing protein. (447 aa)
	PV08_10010	Uncharacterized protein. (1018 aa)
	PV08_10647	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). (926 aa)
	PV08_11329	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)
	PV08_03724	Uncharacterized protein. (871 aa)
	PV08_05231	Uncharacterized protein. (533 aa)
	PV08_11283	ERCC4 domain-containing protein. (944 aa)
	PV08_04892	FHA domain-containing protein. (854 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_01079	PV08_06173	A0A0D2CAD1	A0A0D1ZTL9	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.478
PV08_01079	PV08_11283	A0A0D2CAD1	A0A0D1Y5Y9	Uncharacterized protein.	ERCC4 domain-containing protein.	0.423
PV08_02267	PV08_03499	A0A0D2AA93	A0A0D2BKS6	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.862
PV08_02267	PV08_04892	A0A0D2AA93	A0A0D1ZYG5	Helicase ATP-binding domain-containing protein.	FHA domain-containing protein.	0.735
PV08_02267	PV08_04922	A0A0D2AA93	A0A0D1ZYJ0	Helicase ATP-binding domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.546
PV08_02267	PV08_05231	A0A0D2AA93	A0A0D1YJM9	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.886
PV08_02267	PV08_06173	A0A0D2AA93	A0A0D1ZTL9	Helicase ATP-binding domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.910
PV08_02267	PV08_08818	A0A0D2AA93	A0A0D1ZLD2	Helicase ATP-binding domain-containing protein.	RECA_2 domain-containing protein.	0.880
PV08_02267	PV08_10647	A0A0D2AA93	A0A0D1ZEB6	Helicase ATP-binding domain-containing protein.	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).	0.652
PV08_02267	PV08_11283	A0A0D2AA93	A0A0D1Y5Y9	Helicase ATP-binding domain-containing protein.	ERCC4 domain-containing protein.	0.881
PV08_02267	PV08_11329	A0A0D2AA93	A0A0D1ZBF2	Helicase ATP-binding domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.926
PV08_03499	PV08_02267	A0A0D2BKS6	A0A0D2AA93	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.862
PV08_03499	PV08_03724	A0A0D2BKS6	A0A0D1YNA6	Uncharacterized protein.	Uncharacterized protein.	0.862
PV08_03499	PV08_04892	A0A0D2BKS6	A0A0D1ZYG5	Uncharacterized protein.	FHA domain-containing protein.	0.999
PV08_03499	PV08_04922	A0A0D2BKS6	A0A0D1ZYJ0	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.408
PV08_03499	PV08_05231	A0A0D2BKS6	A0A0D1YJM9	Uncharacterized protein.	Uncharacterized protein.	0.940
PV08_03499	PV08_06173	A0A0D2BKS6	A0A0D1ZTL9	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.869
PV08_03499	PV08_07322	A0A0D2BKS6	A0A0D2B6P6	Uncharacterized protein.	Uncharacterized protein.	0.862
PV08_03499	PV08_08227	A0A0D2BKS6	A0A0D2B375	Uncharacterized protein.	Uncharacterized protein.	0.636
PV08_03499	PV08_08818	A0A0D2BKS6	A0A0D1ZLD2	Uncharacterized protein.	RECA_2 domain-containing protein.	0.852