STRINGSTRING
PV08_06178 PV08_06178 PV08_09911 PV08_09911 PV08_07242 PV08_07242 PV08_07309 PV08_07309 PV08_05815 PV08_05815 PV08_06284 PV08_06284 PV08_06475 PV08_06475 PV08_11891 PV08_11891 PV08_11625 PV08_11625 PV08_10646 PV08_10646 PV08_08058 PV08_08058 PV08_06432 PV08_06432 PV08_04116 PV08_04116 PV08_00225 PV08_00225 PV08_00265 PV08_00265 PV08_00941 PV08_00941 PV08_01399 PV08_01399 PV08_01986 PV08_01986 PV08_11536 PV08_11536 PV08_10291 PV08_10291 PV08_10959 PV08_10959 PV08_01074 PV08_01074 PV08_03558 PV08_03558 PV08_04593 PV08_04593 PV08_07811 PV08_07811 PV08_01865 PV08_01865 PV08_01835 PV08_01835 PV08_08930 PV08_08930 PV08_09816 PV08_09816 PV08_00613 PV08_00613 PV08_00518 PV08_00518 PV08_00122 PV08_00122 PV08_09353 PV08_09353 PV08_00373 PV08_00373 PV08_00368 PV08_00368 PV08_00060 PV08_00060 PV08_03527 PV08_03527 PV08_10825 PV08_10825 PV08_02372 PV08_02372 PV08_04020 PV08_04020 PV08_03843 PV08_03843 PV08_03953 PV08_03953 PV08_09180 PV08_09180 PV08_08139 PV08_08139 PV08_08555 PV08_08555 PV08_08868 PV08_08868 PV08_05573 PV08_05573 PV08_05585 PV08_05585 PV08_02460 PV08_02460 PV08_00462 PV08_00462 PV08_00612 PV08_00612 PV08_01511 PV08_01511 PV08_01531 PV08_01531 PV08_01987 PV08_01987 PV08_10718 PV08_10718 PV08_10670 PV08_10670 PV08_06436 PV08_06436
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_06178Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PV08_09911Uncharacterized protein. (271 aa)
PV08_07242Uncharacterized protein. (704 aa)
PV08_07309DUF3591 domain-containing protein. (1129 aa)
PV08_05815DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1213 aa)
PV08_06284HTH TFE/IIEalpha-type domain-containing protein. (514 aa)
PV08_06475BTB domain-containing protein. (972 aa)
PV08_11891Uncharacterized protein. (1070 aa)
PV08_11625TATA-box-binding protein. (306 aa)
PV08_10646Fungal_trans domain-containing protein. (577 aa)
PV08_08058Uncharacterized protein. (558 aa)
PV08_06432TFIIE beta domain-containing protein. (231 aa)
PV08_04116Uncharacterized protein. (327 aa)
PV08_00225Acyl_transf_3 domain-containing protein. (372 aa)
PV08_00265DNA-directed RNA polymerase. (193 aa)
PV08_00941Uncharacterized protein. (301 aa)
PV08_01399Fungal_trans domain-containing protein. (633 aa)
PV08_01986Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
PV08_11536Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (112 aa)
PV08_10291TAF8_C domain-containing protein. (309 aa)
PV08_10959Uncharacterized protein. (441 aa)
PV08_01074Uncharacterized protein. (478 aa)
PV08_03558Uncharacterized protein. (376 aa)
PV08_04593SWIB domain-containing protein. (285 aa)
PV08_07811Acyl_transf_3 domain-containing protein. (499 aa)
PV08_01865Transcription elongation factor S-II. (305 aa)
PV08_01835Uncharacterized protein. (2890 aa)
PV08_08930TAF domain-containing protein. (450 aa)
PV08_09816Uncharacterized protein. (188 aa)
PV08_00613Uncharacterized protein. (529 aa)
PV08_00518RPOL4c domain-containing protein. (152 aa)
PV08_00122Uncharacterized protein. (1262 aa)
PV08_09353TAFII28 domain-containing protein. (373 aa)
PV08_00373TFIIB-type domain-containing protein. (357 aa)
PV08_00368TFIID_20kDa domain-containing protein. (572 aa)
PV08_00060DNA repair helicase rad15. (816 aa)
PV08_03527CBFD_NFYB_HMF domain-containing protein. (327 aa)
PV08_10825Uncharacterized protein. (572 aa)
PV08_02372Uncharacterized protein. (843 aa)
PV08_04020CBFD_NFYB_HMF domain-containing protein. (159 aa)
PV08_03843Uncharacterized protein. (217 aa)
PV08_03953Zn(2)-C6 fungal-type domain-containing protein. (635 aa)
PV08_09180Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (241 aa)
PV08_08139Uncharacterized protein. (384 aa)
PV08_08555Uncharacterized protein. (973 aa)
PV08_08868Uncharacterized protein. (692 aa)
PV08_05573Zn(2)-C6 fungal-type domain-containing protein. (668 aa)
PV08_05585SANT domain-containing protein. (680 aa)
PV08_02460Uncharacterized protein. (768 aa)
PV08_00462Uncharacterized protein. (384 aa)
PV08_00612S1 domain-containing protein. (167 aa)
PV08_01511TAFII55_N domain-containing protein. (764 aa)
PV08_01531DUF4211 domain-containing protein. (731 aa)
PV08_01987Uncharacterized protein. (343 aa)
PV08_10718Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (697 aa)
PV08_10670HMG box domain-containing protein. (325 aa)
PV08_06436Uncharacterized protein. (541 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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