STRINGSTRING
PV08_11001 PV08_11001 PV08_02049 PV08_02049 PV08_01483 PV08_01483 PV08_01246 PV08_01246 PV08_01079 PV08_01079 PV08_00404 PV08_00404 PV08_03558 PV08_03558 PV08_03538 PV08_03538 PV08_03344 PV08_03344 PV08_03048 PV08_03048 PV08_05049 PV08_05049 PV08_05224 PV08_05224 PV08_07811 PV08_07811 PV08_01865 PV08_01865 PV08_08930 PV08_08930 PV08_01484 PV08_01484 PV08_00705 PV08_00705 PV08_09841 PV08_09841 PV08_00923 PV08_00923 PV08_00518 PV08_00518 PV08_00122 PV08_00122 PV08_09353 PV08_09353 PV08_00373 PV08_00373 PV08_04020 PV08_04020 PV08_11390 PV08_11390 PV08_11580 PV08_11580 PV08_11407 PV08_11407 PV08_11625 PV08_11625 PV08_10340 PV08_10340 PV08_10406 PV08_10406 PV08_01340 PV08_01340 PV08_01511 PV08_01511 PV08_01531 PV08_01531 PV08_01987 PV08_01987 PV08_11225 PV08_11225 PV08_11146 PV08_11146 PV08_02977 PV08_02977 PV08_02372 PV08_02372 PV08_00612 PV08_00612 PV08_03302 PV08_03302 PV08_02460 PV08_02460 PV08_02374 PV08_02374 PV08_03780 PV08_03780 PV08_05573 PV08_05573 PV08_06873 PV08_06873 PV08_08139 PV08_08139 PV08_09180 PV08_09180 PV08_10291 PV08_10291 PV08_11234 PV08_11234 PV08_01986 PV08_01986 PV08_01525 PV08_01525 PV08_01510 PV08_01510 PV08_01399 PV08_01399 PV08_01156 PV08_01156 PV08_01121 PV08_01121 PV08_00941 PV08_00941 PV08_00225 PV08_00225 PV08_03341 PV08_03341 PV08_04142 PV08_04142 PV08_06432 PV08_06432 PV08_06807 PV08_06807 PV08_08398 PV08_08398 PV08_09833 PV08_09833 PV08_10943 PV08_10943 PV08_10661 PV08_10661 PV08_03843 PV08_03843 PV08_10646 PV08_10646 PV08_03953 PV08_03953 PV08_06475 PV08_06475 PV08_06284 PV08_06284 PV08_05248 PV08_05248 PV08_07309 PV08_07309 PV08_07242 PV08_07242 PV08_08841 PV08_08841 PV08_08678 PV08_08678 PV08_09898 PV08_09898 PV08_09832 PV08_09832 PV08_09911 PV08_09911 PV08_09645 PV08_09645 PV08_09062 PV08_09062 PV08_10937 PV08_10937 PV08_09080 PV08_09080 PV08_10670 PV08_10670 PV08_10718 PV08_10718 PV08_10374 PV08_10374 PV08_10187 PV08_10187 PV08_02666 PV08_02666 PV08_03909 PV08_03909 PV08_02546 PV08_02546 PV08_11195 PV08_11195 PV08_03527 PV08_03527 PV08_00368 PV08_00368 PV08_00095 PV08_00095 PV08_00060 PV08_00060
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_11001DNA-directed RNA polymerase I, II, and III subunit RPABC5. (86 aa)
PV08_02049Uncharacterized protein. (749 aa)
PV08_01483Uncharacterized protein. (372 aa)
PV08_01246CCHC-type domain-containing protein. (2242 aa)
PV08_01079Uncharacterized protein. (1666 aa)
PV08_00404Uncharacterized protein. (540 aa)
PV08_03558Uncharacterized protein. (376 aa)
PV08_03538Uncharacterized protein. (847 aa)
PV08_03344RNase_PH domain-containing protein. (258 aa)
PV08_03048Rtt106 domain-containing protein. (519 aa)
PV08_05049Uncharacterized protein. (732 aa)
PV08_05224Uncharacterized protein. (490 aa)
PV08_07811Acyl_transf_3 domain-containing protein. (499 aa)
PV08_01865Transcription elongation factor S-II. (305 aa)
PV08_08930TAF domain-containing protein. (450 aa)
PV08_01484Uncharacterized protein. (313 aa)
PV08_00705Uncharacterized protein. (152 aa)
PV08_09841RNase III domain-containing protein. (313 aa)
PV08_00923Uncharacterized protein. (621 aa)
PV08_00518RPOL4c domain-containing protein. (152 aa)
PV08_00122Uncharacterized protein. (1262 aa)
PV08_09353TAFII28 domain-containing protein. (373 aa)
PV08_00373TFIIB-type domain-containing protein. (357 aa)
PV08_04020CBFD_NFYB_HMF domain-containing protein. (159 aa)
PV08_11390Uncharacterized protein. (506 aa)
PV08_11580Uncharacterized protein. (613 aa)
PV08_11407Uncharacterized protein. (571 aa)
PV08_11625TATA-box-binding protein. (306 aa)
PV08_10340Uncharacterized protein. (838 aa)
PV08_10406Uncharacterized protein. (1122 aa)
PV08_01340RNA_pol_L_2 domain-containing protein. (243 aa)
PV08_01511TAFII55_N domain-containing protein. (764 aa)
PV08_01531DUF4211 domain-containing protein. (731 aa)
PV08_01987Uncharacterized protein. (343 aa)
PV08_11225Uncharacterized protein. (967 aa)
PV08_11146Serine/threonine-protein kinase bur1. (655 aa)
PV08_02977General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (459 aa)
PV08_02372Uncharacterized protein. (843 aa)
PV08_00612S1 domain-containing protein. (167 aa)
PV08_03302DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1772 aa)
PV08_02460Uncharacterized protein. (768 aa)
PV08_02374Fungal_trans domain-containing protein. (831 aa)
PV08_03780Uncharacterized protein. (2322 aa)
PV08_05573Zn(2)-C6 fungal-type domain-containing protein. (668 aa)
PV08_06873BSD domain-containing protein. (630 aa)
PV08_08139Uncharacterized protein. (384 aa)
PV08_09180Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (241 aa)
PV08_10291TAF8_C domain-containing protein. (309 aa)
PV08_11234Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (144 aa)
PV08_01986Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
PV08_01525Uncharacterized protein. (505 aa)
PV08_01510BTP domain-containing protein. (233 aa)
PV08_01399Fungal_trans domain-containing protein. (633 aa)
PV08_01156RAI1 domain-containing protein. (394 aa)
PV08_01121Uncharacterized protein. (1215 aa)
PV08_00941Uncharacterized protein. (301 aa)
PV08_00225Acyl_transf_3 domain-containing protein. (372 aa)
PV08_03341DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1294 aa)
PV08_04142Uncharacterized protein. (346 aa)
PV08_06432TFIIE beta domain-containing protein. (231 aa)
PV08_06807Uncharacterized protein. (757 aa)
PV08_08398Uncharacterized protein. (74 aa)
PV08_09833Uncharacterized protein. (226 aa)
PV08_10943RRM domain-containing protein. (804 aa)
PV08_10661PCI domain-containing protein. (461 aa)
PV08_03843Uncharacterized protein. (217 aa)
PV08_10646Fungal_trans domain-containing protein. (577 aa)
PV08_03953Zn(2)-C6 fungal-type domain-containing protein. (635 aa)
PV08_06475BTB domain-containing protein. (972 aa)
PV08_06284HTH TFE/IIEalpha-type domain-containing protein. (514 aa)
PV08_05248Uncharacterized protein. (943 aa)
PV08_07309DUF3591 domain-containing protein. (1129 aa)
PV08_07242Uncharacterized protein. (704 aa)
PV08_08841CID domain-containing protein. (646 aa)
PV08_08678Uncharacterized protein. (673 aa)
PV08_09898Uncharacterized protein. (238 aa)
PV08_09832Uncharacterized protein. (357 aa)
PV08_09911Uncharacterized protein. (271 aa)
PV08_09645Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (423 aa)
PV08_09062RPOLD domain-containing protein. (334 aa)
PV08_10937Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
PV08_09080DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PV08_10670HMG box domain-containing protein. (325 aa)
PV08_10718Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (697 aa)
PV08_10374Plus3 domain-containing protein. (611 aa)
PV08_10187Uncharacterized protein. (416 aa)
PV08_02666Zn(2)-C6 fungal-type domain-containing protein. (680 aa)
PV08_03909CYCLIN domain-containing protein; Belongs to the cyclin family. (376 aa)
PV08_02546Protein kinase domain-containing protein. (992 aa)
PV08_11195Uncharacterized protein. (346 aa)
PV08_03527CBFD_NFYB_HMF domain-containing protein. (327 aa)
PV08_00368TFIID_20kDa domain-containing protein. (572 aa)
PV08_00095CDC73_C domain-containing protein. (444 aa)
PV08_00060DNA repair helicase rad15. (816 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.