66 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_03771	Uncharacterized protein. (568 aa)
	PV08_06134	Uncharacterized protein. (480 aa)
	PV08_05628	Dopey_N domain-containing protein. (1669 aa)
	PV08_05386	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (978 aa)
	PV08_05514	Uncharacterized protein. (262 aa)
	PV08_07787	Homeobox domain-containing protein. (693 aa)
	PV08_07855	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1056 aa)
	PV08_07820	PCI domain-containing protein. (312 aa)
	PV08_07550	Uncharacterized protein. (278 aa)
	PV08_06699	Uncharacterized protein. (220 aa)
	PV08_08190	COP9 signalosome complex subunit 2. (505 aa)
	PV08_09403	Uncharacterized protein. (506 aa)
	PV08_10952	Uncharacterized protein. (843 aa)
	PV08_10280	PCI domain-containing protein. (487 aa)
	PV08_11871	Stress-response A/B barrel domain-containing protein. (128 aa)
	PV08_10289	Rad51 domain-containing protein. (519 aa)
	PV08_10219	HET domain-containing protein. (288 aa)
	PV08_10433	Uncharacterized protein. (552 aa)
	PV08_01807	TMF_TATA_bd domain-containing protein. (819 aa)
	PV08_00742	Uncharacterized protein. (688 aa)
	PV08_07587	Uncharacterized protein. (1201 aa)
	PV08_07144	Guanine nucleotide-binding protein alpha-1 subunit. (353 aa)
	PV08_06683	Protein kinase domain-containing protein. (309 aa)
	PV08_06627	Uncharacterized protein. (1133 aa)
	PV08_08119	Uncharacterized protein. (1202 aa)
	PV08_01981	Uncharacterized protein. (4343 aa)
	PV08_01951	Uncharacterized protein. (827 aa)
	PV08_01585	TIP120 domain-containing protein. (1338 aa)
	PV08_03090	Uncharacterized protein. (282 aa)
	PV08_04811	Uncharacterized protein. (201 aa)
	PV08_03925	Uncharacterized protein. (1466 aa)
	PV08_08614	Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC). (214 aa)
	PV08_06692	UDPG_MGDP_dh_C domain-containing protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (392 aa)
	PV08_07380	Uncharacterized protein. (766 aa)
	PV08_07798	Uncharacterized protein. (775 aa)
	PV08_04241	Uncharacterized protein. (1610 aa)
	PV08_04963	WD_REPEATS_REGION domain-containing protein. (1302 aa)
	PV08_04988	Uncharacterized protein. (453 aa)
	PV08_05128	Uncharacterized protein. (454 aa)
	PV08_10158	Protein kinase domain-containing protein. (680 aa)
	PV08_10579	EXPERA domain-containing protein. (258 aa)
	PV08_03262	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (254 aa)
	PV08_08036	Fungal_trans domain-containing protein. (540 aa)
	PV08_08061	UDPG_MGDP_dh_C domain-containing protein. (643 aa)
	PV08_08126	Uncharacterized protein. (483 aa)
	PV08_00975	Uncharacterized protein; Belongs to the pirin family. (305 aa)
	PV08_08361	PlsC domain-containing protein. (781 aa)
	PV08_01180	Uncharacterized protein. (1427 aa)
	PV08_01378	Uncharacterized protein. (476 aa)
	PV08_07851	Uncharacterized protein. (705 aa)
	PV08_05224	Uncharacterized protein. (490 aa)
	PV08_05249	Uncharacterized protein. (237 aa)
	PV08_05269	Uncharacterized protein. (416 aa)
	PV08_05764	Uncharacterized protein. (336 aa)
	PV08_04211	Uncharacterized protein. (478 aa)
	PV08_06518	Uncharacterized protein. (262 aa)
	PV08_03913	WD_REPEATS_REGION domain-containing protein. (338 aa)
	PV08_04129	Uncharacterized protein; Belongs to the protein kinase superfamily. (460 aa)
	PV08_04345	Uncharacterized protein. (623 aa)
	PV08_02752	Stress-response A/B barrel domain-containing protein. (101 aa)
	PV08_00549	PCI domain-containing protein. (479 aa)
	PV08_00964	Uncharacterized protein. (1879 aa)
	PV08_10561	Protein kinase domain-containing protein. (546 aa)
	PV08_08133	Uncharacterized protein. (313 aa)
	PV08_04550	MPN domain-containing protein. (416 aa)
	PV08_04123	IPPc domain-containing protein. (1098 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00549	PV08_04550	A0A0D2C8V9	A0A0D2BED6	PCI domain-containing protein.	MPN domain-containing protein.	0.999
PV08_00549	PV08_06627	A0A0D2C8V9	A0A0D1ZLX7	PCI domain-containing protein.	Uncharacterized protein.	0.698
PV08_00549	PV08_07820	A0A0D2C8V9	A0A0D2B839	PCI domain-containing protein.	PCI domain-containing protein.	0.999
PV08_00549	PV08_08190	A0A0D2C8V9	A0A0D2B2B5	PCI domain-containing protein.	COP9 signalosome complex subunit 2.	0.999
PV08_00549	PV08_10280	A0A0D2C8V9	A0A0D1Y7U2	PCI domain-containing protein.	PCI domain-containing protein.	0.999
PV08_00742	PV08_04129	A0A0D2A5W1	A0A0D2C012	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.418
PV08_00964	PV08_05224	A0A0D2C9Z7	A0A0D2BV93	Uncharacterized protein.	Uncharacterized protein.	0.596
PV08_00964	PV08_07798	A0A0D2C9Z7	A0A0D1YJB3	Uncharacterized protein.	Uncharacterized protein.	0.487
PV08_00964	PV08_10280	A0A0D2C9Z7	A0A0D1Y7U2	Uncharacterized protein.	PCI domain-containing protein.	0.500
PV08_00975	PV08_06683	A0A0D2BPF4	A0A0D1ZM41	Uncharacterized protein; Belongs to the pirin family.	Protein kinase domain-containing protein.	0.491
PV08_01951	PV08_07144	A0A0D1Z132	A0A0D1ZNE3	Uncharacterized protein.	Guanine nucleotide-binding protein alpha-1 subunit.	0.641
PV08_01951	PV08_10561	A0A0D1Z132	A0A0D1Y8D7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.460
PV08_01981	PV08_05249	A0A0D1Z165	A0A0D2BVB1	Uncharacterized protein.	Uncharacterized protein.	0.773
PV08_01981	PV08_06699	A0A0D1Z165	A0A0D2B4R8	Uncharacterized protein.	Uncharacterized protein.	0.825
PV08_01981	PV08_10561	A0A0D1Z165	A0A0D1Y8D7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.414
PV08_03090	PV08_05224	A0A0D1YU61	A0A0D2BV93	Uncharacterized protein.	Uncharacterized protein.	0.977
PV08_03090	PV08_07550	A0A0D1YU61	A0A0D2B7V7	Uncharacterized protein.	Uncharacterized protein.	0.416
PV08_03090	PV08_07851	A0A0D1YU61	A0A0D2BV18	Uncharacterized protein.	Uncharacterized protein.	0.576
PV08_04129	PV08_00742	A0A0D2C012	A0A0D2A5W1	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.418
PV08_04241	PV08_10952	A0A0D2BEP2	A0A0D2AYX3	Uncharacterized protein.	Uncharacterized protein.	0.415