STRINGSTRING
PV08_05868 PV08_05868 PV08_06434 PV08_06434 PV08_04674 PV08_04674 PV08_09500 PV08_09500 PV08_11233 PV08_11233 PV08_03331 PV08_03331 PV08_11501 PV08_11501 PV08_00597 PV08_00597 PV08_10082 PV08_10082 PV08_06854 PV08_06854
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_05868Uncharacterized protein. (458 aa)
PV08_064343,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (235 aa)
PV08_046746,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (227 aa)
PV08_09500Flavokinase domain-containing protein. (609 aa)
PV08_11233Uncharacterized protein. (526 aa)
PV08_03331F-box domain-containing protein. (634 aa)
PV08_11501Riboflavin synthase, alpha subunit. (241 aa)
PV08_00597RibD_C domain-containing protein. (669 aa)
PV08_10082Flavokinase domain-containing protein. (217 aa)
PV08_06854GTP cyclohydrolase II. (425 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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