STRINGSTRING
PV08_04371 PV08_04371 PV08_05008 PV08_05008 PV08_11331 PV08_11331 PV08_02441 PV08_02441 PV08_02586 PV08_02586 PV08_10218 PV08_10218 PV08_02811 PV08_02811 PV08_02593 PV08_02593 PV08_02678 PV08_02678 PV08_03042 PV08_03042 PV08_03072 PV08_03072 PV08_03127 PV08_03127 PV08_10714 PV08_10714 PV08_03049 PV08_03049 PV08_03527 PV08_03527 PAN3 PAN3 PV08_03290 PV08_03290 PV08_09152 PV08_09152 PV08_09263 PV08_09263 PV08_00518 PV08_00518 PV08_10608 PV08_10608 PV08_10418 PV08_10418 PV08_10392 PV08_10392 PV08_10077 PV08_10077 PV08_11437 PV08_11437 PV08_12104 PV08_12104 PV08_11853 PV08_11853 PV08_12027 PV08_12027 PV08_01461 PV08_01461 PV08_00962 PV08_00962 PV08_00742 PV08_00742 PV08_00352 PV08_00352 PV08_03697 PV08_03697 PV08_05062 PV08_05062 PV08_04626 PV08_04626 PV08_03982 PV08_03982 PV08_06484 PV08_06484 PV08_06103 PV08_06103 PV08_05927 PV08_05927 PV08_07552 PV08_07552 PV08_07241 PV08_07241 PV08_02879 PV08_02879 PV08_03055 PV08_03055 PV08_03540 PV08_03540 PV08_00831 PV08_00831 PV08_00921 PV08_00921 PV08_02116 PV08_02116 PV08_10374 PV08_10374 PV08_02246 PV08_02246 PV08_11209 PV08_11209 PV08_10101 PV08_10101 PV08_08264 PV08_08264 PV08_06627 PV08_06627 PV08_06728 PV08_06728 PV08_07195 PV08_07195 PV08_01113 PV08_01113 PV08_01088 PV08_01088 PV08_00928 PV08_00928 PV08_00535 PV08_00535 PV08_00355 PV08_00355 PV08_00683 PV08_00683 PV08_11137 PV08_11137 PV08_09240 PV08_09240 PV08_09979 PV08_09979 PV08_08770 PV08_08770 PV08_06591 PV08_06591 PV08_06782 PV08_06782 PV08_06847 PV08_06847 PV08_07255 PV08_07255 PV08_07763 PV08_07763 PV08_05236 PV08_05236 PV08_06232 PV08_06232 PV08_03153 PV08_03153 PV08_03048 PV08_03048 PV08_03008 PV08_03008 PV08_03003 PV08_03003 PV08_05069 PV08_05069 PV08_01205 PV08_01205 PV08_04531 PV08_04531 PV08_03913 PV08_03913 PV08_06435 PV08_06435 PV08_06110 PV08_06110 PV08_05804 PV08_05804 PV08_05794 PV08_05794 PV08_05339 PV08_05339 PV08_07836 PV08_07836 PV08_07428 PV08_07428 PV08_07403 PV08_07403 PV08_01955 PV08_01955 PV08_06850 PV08_06850 PV08_01433 PV08_01433 PV08_01368 PV08_01368 PV08_01723 PV08_01723 PV08_08116 PV08_08116 PV08_00925 PV08_00925 PV08_00915 PV08_00915 PV08_06277 PV08_06277 PV08_06478 PV08_06478 PV08_04121 PV08_04121 PV08_04821 PV08_04821 PV08_01618 PV08_01618 PV08_01688 PV08_01688 PV08_02114 PV08_02114 PV08_10718 PV08_10718 PV08_10720 PV08_10720 PV08_10937 PV08_10937 PV08_09223 PV08_09223 PV08_09539 PV08_09539 PV08_09896 PV08_09896 PV08_08170 PV08_08170 PV08_08466 PV08_08466 PV08_08272 PV08_08272 PV08_08854 PV08_08854 PV08_06919 PV08_06919 PV08_06654 PV08_06654 PV08_06954 PV08_06954 PV08_06801 PV08_06801 LSM1 LSM1 PV08_07117 PV08_07117 PAN2 PAN2 PV08_07623 PV08_07623 PV08_07855 PV08_07855 PV08_05248 PV08_05248 PV08_05391 PV08_05391 PV08_05790 PV08_05790 PV08_06482 PV08_06482 PV08_06545 PV08_06545 PV08_04020 PV08_04020
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_04371Ribosomal protein L13. (166 aa)
PV08_05008Uncharacterized protein. (650 aa)
PV08_11331Uncharacterized protein. (800 aa)
PV08_02441Uncharacterized protein. (561 aa)
PV08_02586PUM-HD domain-containing protein. (741 aa)
PV08_10218WD_REPEATS_REGION domain-containing protein. (782 aa)
PV08_02811NTP_transf_9 domain-containing protein. (163 aa)
PV08_02593PUM-HD domain-containing protein. (992 aa)
PV08_02678KH_dom_type_1 domain-containing protein. (246 aa)
PV08_03042HMG box domain-containing protein. (471 aa)
PV08_03072Deacetylase sirtuin-type domain-containing protein. (617 aa)
PV08_03127Uncharacterized protein. (529 aa)
PV08_10714Uncharacterized protein. (629 aa)
PV08_03049Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (358 aa)
PV08_03527CBFD_NFYB_HMF domain-containing protein. (327 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (642 aa)
PV08_03290Hist_deacetyl domain-containing protein. (367 aa)
PV08_09152Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (818 aa)
PV08_09263Uncharacterized protein. (113 aa)
PV08_00518RPOL4c domain-containing protein. (152 aa)
PV08_10608S1 motif domain-containing protein. (350 aa)
PV08_10418HRDC domain-containing protein. (822 aa)
PV08_10392Uncharacterized protein. (1056 aa)
PV08_10077Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)
PV08_11437Uncharacterized protein. (2310 aa)
PV08_12104Deacetylase sirtuin-type domain-containing protein. (427 aa)
PV08_11853Chromo domain-containing protein. (251 aa)
PV08_12027Chromo domain-containing protein. (251 aa)
PV08_01461Uncharacterized protein. (1065 aa)
PV08_00962Uncharacterized protein. (330 aa)
PV08_00742Uncharacterized protein. (688 aa)
PV08_00352SAP30_Sin3_bdg domain-containing protein. (329 aa)
PV08_03697Uncharacterized protein. (610 aa)
PV08_05062Uncharacterized protein. (992 aa)
PV08_04626Uncharacterized protein. (824 aa)
PV08_03982Endo/exonuclease/phosphatase domain-containing protein. (687 aa)
PV08_06484DUF1752 domain-containing protein. (545 aa)
PV08_06103Uncharacterized protein. (638 aa)
PV08_05927Uncharacterized protein. (867 aa)
PV08_07552Uncharacterized protein. (292 aa)
PV08_07241PAP-associated domain-containing protein. (1360 aa)
PV08_02879SANT domain-containing protein. (797 aa)
PV08_03055Uncharacterized protein. (188 aa)
PV08_03540Protein kinase domain-containing protein. (655 aa)
PV08_00831Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (255 aa)
PV08_00921Thioredoxin-like_fold domain-containing protein. (210 aa)
PV08_02116PAT1 domain-containing protein. (799 aa)
PV08_10374Plus3 domain-containing protein. (611 aa)
PV08_02246Uncharacterized protein. (235 aa)
PV08_11209WD_REPEATS_REGION domain-containing protein. (624 aa)
PV08_10101Uncharacterized protein. (291 aa)
PV08_08264Uncharacterized protein. (435 aa)
PV08_06627Uncharacterized protein. (1133 aa)
PV08_06728RNase_PH domain-containing protein. (267 aa)
PV08_07195WD_REPEATS_REGION domain-containing protein. (611 aa)
PV08_01113Non-specific serine/threonine protein kinase. (874 aa)
PV08_01088Uncharacterized protein. (970 aa)
PV08_00928UV excision repair protein Rad23. (839 aa)
PV08_00535Uncharacterized protein. (664 aa)
PV08_00355Uncharacterized protein. (433 aa)
PV08_00683Ubiquitin carboxyl-terminal hydrolase. (728 aa)
PV08_11137ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (505 aa)
PV08_09240Nudix hydrolase domain-containing protein. (897 aa)
PV08_09979GFO_IDH_MocA domain-containing protein. (363 aa)
PV08_08770Uncharacterized protein. (378 aa)
PV08_06591Chromo domain-containing protein. (186 aa)
PV08_06782GFO_IDH_MocA domain-containing protein. (375 aa)
PV08_06847RNase_PH domain-containing protein. (369 aa)
PV08_072553-dehydroquinate dehydratase, type I. (820 aa)
PV08_07763ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (512 aa)
PV08_05236Uncharacterized protein. (1136 aa)
PV08_06232Uncharacterized protein. (686 aa)
PV08_03153Uncharacterized protein. (251 aa)
PV08_03048Rtt106 domain-containing protein. (519 aa)
PV08_03008HDAC_interact domain-containing protein. (1515 aa)
PV08_03003Uncharacterized protein. (473 aa)
PV08_05069ATP-dependent RNA helicase ded1; Belongs to the DEAD box helicase family. (690 aa)
PV08_01205RNase_PH domain-containing protein. (363 aa)
PV08_04531PUM-HD domain-containing protein. (890 aa)
PV08_03913WD_REPEATS_REGION domain-containing protein. (338 aa)
PV08_06435Deacetylase sirtuin-type domain-containing protein. (605 aa)
PV08_06110Uncharacterized protein. (414 aa)
PV08_05804Tr-type G domain-containing protein. (702 aa)
PV08_05794Uncharacterized protein. (674 aa)
PV08_05339Uncharacterized protein. (770 aa)
PV08_07836Uncharacterized protein. (104 aa)
PV08_07428WD_REPEATS_REGION domain-containing protein. (537 aa)
PV08_07403Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (358 aa)
PV08_01955Uncharacterized protein. (755 aa)
PV08_06850GFO_IDH_MocA domain-containing protein. (369 aa)
PV08_01433FAS1 domain-containing protein. (239 aa)
PV08_01368R3H domain-containing protein. (486 aa)
PV08_01723Uncharacterized protein. (1512 aa)
PV08_08116Deacetylase sirtuin-type domain-containing protein. (533 aa)
PV08_00925Uncharacterized protein. (453 aa)
PV08_00915Uncharacterized protein. (476 aa)
PV08_06277Uncharacterized protein. (139 aa)
PV08_06478Non-specific serine/threonine protein kinase. (872 aa)
PV08_04121Uncharacterized protein. (459 aa)
PV08_04821zf-LYAR domain-containing protein. (530 aa)
PV08_01618Protein kinase domain-containing protein. (735 aa)
PV08_01688Uncharacterized protein. (360 aa)
PV08_02114WD_REPEATS_REGION domain-containing protein. (185 aa)
PV08_10718Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (697 aa)
PV08_10720NTP_transf_9 domain-containing protein. (266 aa)
PV08_10937Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
PV08_09223Telo_bind domain-containing protein. (645 aa)
PV08_09539Chromo domain-containing protein. (1113 aa)
PV08_09896Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (313 aa)
PV08_0817060S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
PV08_08466PUM-HD domain-containing protein. (685 aa)
PV08_08272Uncharacterized protein. (396 aa)
PV08_08854NmrA domain-containing protein. (353 aa)
PV08_06919Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1311 aa)
PV08_06654Protein vts1. (611 aa)
PV08_06954Protein GZF3. (279 aa)
PV08_06801TPR_REGION domain-containing protein. (800 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (175 aa)
PV08_07117Uncharacterized protein. (268 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1201 aa)
PV08_07623W2 domain-containing protein. (424 aa)
PV08_07855BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1056 aa)
PV08_05248Uncharacterized protein. (943 aa)
PV08_05391Uncharacterized protein. (1900 aa)
PV08_05790Uncharacterized protein. (1190 aa)
PV08_06482Chromo domain-containing protein. (251 aa)
PV08_06545Protein kinase domain-containing protein. (1146 aa)
PV08_04020CBFD_NFYB_HMF domain-containing protein. (159 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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