13 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cprA	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (691 aa)
	PV08_11799	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (287 aa)
	PV08_02349	2Fe-2S ferredoxin-type domain-containing protein. (210 aa)
	PV08_03901	FAD-binding FR-type domain-containing protein. (426 aa)
	PV08_02469	Uncharacterized protein. (350 aa)
	PV08_10671	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (336 aa)
	PV08_01838	Uncharacterized protein. (203 aa)
	PV08_04687	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (205 aa)
	TAH18	NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (645 aa)
	PV08_06472	Uncharacterized protein. (583 aa)
	PV08_02452	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family. (1057 aa)
	PV08_05425	FAD-binding FR-type domain-containing protein. (312 aa)
	PV08_07881	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family. (1055 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_01838	PV08_02349	A0A0D2BQJ5	A0A0D1ZZF4	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.485
PV08_01838	PV08_04687	A0A0D2BQJ5	A0A0D2BEV9	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.509
PV08_02349	PV08_01838	A0A0D1ZZF4	A0A0D2BQJ5	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.485
PV08_02349	PV08_02452	A0A0D1ZZF4	A0A0D2C3G3	2Fe-2S ferredoxin-type domain-containing protein.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.722
PV08_02349	PV08_02469	A0A0D1ZZF4	A0A0D1YSF3	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.485
PV08_02349	PV08_03901	A0A0D1ZZF4	A0A0D1ZVG4	2Fe-2S ferredoxin-type domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.485
PV08_02349	PV08_04687	A0A0D1ZZF4	A0A0D2BEV9	2Fe-2S ferredoxin-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.705
PV08_02349	PV08_05425	A0A0D1ZZF4	A0A0D2BVQ9	2Fe-2S ferredoxin-type domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.485
PV08_02349	PV08_06472	A0A0D1ZZF4	A0A0D2BCS6	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.795
PV08_02349	PV08_07881	A0A0D1ZZF4	A0A0D2BV36	2Fe-2S ferredoxin-type domain-containing protein.	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	0.722
PV08_02349	PV08_10671	A0A0D1ZZF4	A0A0D1Y8Q4	2Fe-2S ferredoxin-type domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.503
PV08_02349	PV08_11799	A0A0D1ZZF4	A0A0D2ATK2	2Fe-2S ferredoxin-type domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.584
PV08_02349	TAH18	A0A0D1ZZF4	A0A0D2BDA0	2Fe-2S ferredoxin-type domain-containing protein.	NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.759
PV08_02349	cprA	A0A0D1ZZF4	A0A0D2AZL6	2Fe-2S ferredoxin-type domain-containing protein.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.722
PV08_02452	PV08_02349	A0A0D2C3G3	A0A0D1ZZF4	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	2Fe-2S ferredoxin-type domain-containing protein.	0.722
PV08_02452	PV08_04687	A0A0D2C3G3	A0A0D2BEV9	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.800
PV08_02469	PV08_02349	A0A0D1YSF3	A0A0D1ZZF4	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.485
PV08_02469	PV08_04687	A0A0D1YSF3	A0A0D2BEV9	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.509
PV08_02469	PV08_11799	A0A0D1YSF3	A0A0D2ATK2	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.734
PV08_03901	PV08_02349	A0A0D1ZVG4	A0A0D1ZZF4	FAD-binding FR-type domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.485