Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NTH1 | PV08_02681 | A0A0D2B4Q2 | A0A0D2BHE3 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | Formamidopyrimidine-DNA glycosylase. | 0.809 |
| NTH1 | PV08_03097 | A0A0D2B4Q2 | A0A0D2BIP5 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | UDG domain-containing protein. | 0.527 |
| NTH1 | PV08_05798 | A0A0D2B4Q2 | A0A0D2B9T0 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | ENDO3c domain-containing protein. | 0.668 |
| NTH1 | PV08_06154 | A0A0D2B4Q2 | A0A0D2BAV6 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | Fungal_trans domain-containing protein. | 0.819 |
| NTH1 | PV08_10234 | A0A0D2B4Q2 | A0A0D2AWX5 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | Trehalase. | 0.525 |
| NTH1 | UNG1 | A0A0D2B4Q2 | A0A0D1ZTI4 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.819 |
| PV08_00016 | PV08_01193 | A0A0D2C7B1 | A0A0D2BNY9 | TauD domain-containing protein. | Uncharacterized protein. | 0.414 |
| PV08_00016 | PV08_03178 | A0A0D2C7B1 | A0A0D2C5Q1 | TauD domain-containing protein. | Uncharacterized protein. | 0.575 |
| PV08_00016 | PV08_03484 | A0A0D2C7B1 | A0A0D2BKR5 | TauD domain-containing protein. | NtCtMGAM_N domain-containing protein; Belongs to the glycosyl hydrolase 31 family. | 0.547 |
| PV08_00016 | PV08_03500 | A0A0D2C7B1 | A0A0D1YV90 | TauD domain-containing protein. | Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.544 |
| PV08_00016 | PV08_03602 | A0A0D2C7B1 | A0A0D2BK62 | TauD domain-containing protein. | Uncharacterized protein. | 0.602 |
| PV08_00016 | PV08_04623 | A0A0D2C7B1 | A0A0D2C166 | TauD domain-containing protein. | Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.424 |
| PV08_00016 | PV08_06271 | A0A0D2C7B1 | A0A0D2BC69 | TauD domain-containing protein. | Cellulase domain-containing protein. | 0.544 |
| PV08_00016 | PV08_11776 | A0A0D2C7B1 | A0A0D2AU87 | TauD domain-containing protein. | Uncharacterized protein. | 0.505 |
| PV08_00062 | PV08_00390 | A0A0D2BLQ6 | A0A0D2BMK4 | Uncharacterized protein. | Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. | 0.455 |
| PV08_00062 | PV08_00558 | A0A0D2BLQ6 | A0A0D2BM44 | Uncharacterized protein. | Glyco_hydro_3 domain-containing protein. | 0.703 |
| PV08_00062 | PV08_00977 | A0A0D2BLQ6 | A0A0D2A6K6 | Uncharacterized protein. | Uncharacterized protein. | 0.408 |
| PV08_00062 | PV08_00978 | A0A0D2BLQ6 | A0A0D2BN85 | Uncharacterized protein. | Uncharacterized protein. | 0.408 |
| PV08_00062 | PV08_02182 | A0A0D2BLQ6 | A0A0D2AA25 | Uncharacterized protein. | Fn3_like domain-containing protein. | 0.619 |
| PV08_00062 | PV08_03484 | A0A0D2BLQ6 | A0A0D2BKR5 | Uncharacterized protein. | NtCtMGAM_N domain-containing protein; Belongs to the glycosyl hydrolase 31 family. | 0.675 |
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