21 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_07954	Uncharacterized protein. (472 aa)
	PV08_02353	Uncharacterized protein. (575 aa)
	PV08_03925	Uncharacterized protein. (1466 aa)
	PV08_06546	F-box domain-containing protein. (740 aa)
	PV08_06458	F-box domain-containing protein. (677 aa)
	PV08_05644	F-box domain-containing protein. (553 aa)
	PV08_00922	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (115 aa)
	PV08_06009	Uncharacterized protein. (679 aa)
	PV08_07263	Uncharacterized protein. (942 aa)
	PV08_01178	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (254 aa)
	PV08_03544	Uncharacterized protein. (946 aa)
	PV08_04963	WD_REPEATS_REGION domain-containing protein. (1302 aa)
	PV08_05340	Uncharacterized protein. (712 aa)
	PV08_05310	Uncharacterized protein. (648 aa)
	PV08_07563	Uncharacterized protein. (1082 aa)
	PV08_08440	F-box domain-containing protein. (959 aa)
	PV08_10219	HET domain-containing protein. (288 aa)
	PV08_08119	Uncharacterized protein. (1202 aa)
	PV08_07652	Uncharacterized protein. (678 aa)
	PV08_06531	CULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
	PV08_03815	RING-box protein 1. (125 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00922	PV08_03815	A0A0D2A6D1	A0A0D1ZV76	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	RING-box protein 1.	0.898
PV08_00922	PV08_06531	A0A0D2A6D1	A0A0D1ZUR1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.846
PV08_01178	PV08_03544	A0A0D2BNX4	A0A0D2BKX0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.499
PV08_01178	PV08_03815	A0A0D2BNX4	A0A0D1ZV76	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-box protein 1.	0.984
PV08_01178	PV08_05340	A0A0D2BNX4	A0A0D2B9H2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.719
PV08_01178	PV08_06009	A0A0D2BNX4	A0A0D2BXF3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.783
PV08_01178	PV08_06531	A0A0D2BNX4	A0A0D1ZUR1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.940
PV08_01178	PV08_07263	A0A0D2BNX4	A0A0D2BTB9	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.719
PV08_01178	PV08_07563	A0A0D2BNX4	A0A0D2B766	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.866
PV08_01178	PV08_07652	A0A0D2BNX4	A0A0D1ZPX1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.659
PV08_01178	PV08_08440	A0A0D2BNX4	A0A0D2B2U3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	F-box domain-containing protein.	0.555
PV08_03544	PV08_01178	A0A0D2BKX0	A0A0D2BNX4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.499
PV08_03544	PV08_03815	A0A0D2BKX0	A0A0D1ZV76	Uncharacterized protein.	RING-box protein 1.	0.904
PV08_03544	PV08_05340	A0A0D2BKX0	A0A0D2B9H2	Uncharacterized protein.	Uncharacterized protein.	0.597
PV08_03544	PV08_06009	A0A0D2BKX0	A0A0D2BXF3	Uncharacterized protein.	Uncharacterized protein.	0.696
PV08_03544	PV08_06531	A0A0D2BKX0	A0A0D1ZUR1	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.918
PV08_03544	PV08_07263	A0A0D2BKX0	A0A0D2BTB9	Uncharacterized protein.	Uncharacterized protein.	0.597
PV08_03544	PV08_07563	A0A0D2BKX0	A0A0D2B766	Uncharacterized protein.	Uncharacterized protein.	0.696
PV08_03544	PV08_07652	A0A0D2BKX0	A0A0D1ZPX1	Uncharacterized protein.	Uncharacterized protein.	0.757
PV08_03815	PV08_00922	A0A0D1ZV76	A0A0D2A6D1	RING-box protein 1.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.898