25 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_00879	Uncharacterized protein. (513 aa)
	PV08_01564	Uncharacterized protein. (1823 aa)
	PV08_04670	WD_REPEATS_REGION domain-containing protein. (588 aa)
	PV08_04136	Uncharacterized protein. (900 aa)
	PV08_07878	WD_REPEATS_REGION domain-containing protein. (533 aa)
	PV08_10636	Uncharacterized protein. (403 aa)
	PV08_04666	WD_REPEATS_REGION domain-containing protein. (963 aa)
	PV08_08732	H/ACA ribonucleoprotein complex subunit 3. (64 aa)
	PV08_11002	WD_REPEATS_REGION domain-containing protein. (984 aa)
	PV08_09459	Nop domain-containing protein. (517 aa)
	PV08_09506	Uncharacterized protein. (721 aa)
	PV08_07531	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (266 aa)
	PV08_09817	Nucleolar protein 58. (632 aa)
	PV08_06741	Bms1-type G domain-containing protein. (811 aa)
	PV08_06133	WD_REPEATS_REGION domain-containing protein. (1505 aa)
	PV08_04238	WD_REPEATS_REGION domain-containing protein. (960 aa)
	PV08_09165	RNA helicase. (878 aa)
	PV08_01901	S4 RNA-binding domain-containing protein. (188 aa)
	PV08_08617	Brix domain-containing protein. (296 aa)
	PV08_03280	BP28CT domain-containing protein. (1827 aa)
	PV08_10941	Uncharacterized protein. (388 aa)
	PV08_06111	Bms1-type G domain-containing protein. (1179 aa)
	PV08_03828	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (765 aa)
	PV08_04284	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
	PV08_01683	Uncharacterized protein. (884 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00879	PV08_01564	A0A0D2C9P3	A0A0D2BRE7	Uncharacterized protein.	Uncharacterized protein.	0.997
PV08_00879	PV08_01683	A0A0D2C9P3	A0A0D2CC96	Uncharacterized protein.	Uncharacterized protein.	0.632
PV08_00879	PV08_01901	A0A0D2C9P3	A0A0D1Z0Z2	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.997
PV08_00879	PV08_03280	A0A0D2C9P3	A0A0D2BKA4	Uncharacterized protein.	BP28CT domain-containing protein.	0.992
PV08_00879	PV08_03828	A0A0D2C9P3	A0A0D2BDE9	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.824
PV08_00879	PV08_04136	A0A0D2C9P3	A0A0D1YP66	Uncharacterized protein.	Uncharacterized protein.	0.998
PV08_00879	PV08_04238	A0A0D2C9P3	A0A0D1ZWJ9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
PV08_00879	PV08_04284	A0A0D2C9P3	A0A0D2BDS0	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.982
PV08_00879	PV08_04666	A0A0D2C9P3	A0A0D1ZXW9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.992
PV08_00879	PV08_04670	A0A0D2C9P3	A0A0D1YQH6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
PV08_00879	PV08_06111	A0A0D2C9P3	A0A0D2BBT3	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.998
PV08_00879	PV08_06133	A0A0D2C9P3	A0A0D1ZTI1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.971
PV08_00879	PV08_06741	A0A0D2C9P3	A0A0D2B5K1	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
PV08_00879	PV08_07531	A0A0D2C9P3	A0A0D1ZPJ8	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.954
PV08_00879	PV08_07878	A0A0D2C9P3	A0A0D1YJF5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
PV08_00879	PV08_08617	A0A0D2C9P3	A0A0D2BQM0	Uncharacterized protein.	Brix domain-containing protein.	0.996
PV08_00879	PV08_09165	A0A0D2C9P3	A0A0D1ZFY5	Uncharacterized protein.	RNA helicase.	0.952
PV08_00879	PV08_09459	A0A0D2C9P3	A0A0D2AZN0	Uncharacterized protein.	Nop domain-containing protein.	0.990
PV08_00879	PV08_09817	A0A0D2C9P3	A0A0D2B1Q2	Uncharacterized protein.	Nucleolar protein 58.	0.995
PV08_00879	PV08_10941	A0A0D2C9P3	A0A0D2BK38	Uncharacterized protein.	Uncharacterized protein.	0.997