STRINGSTRING
PV08_10124 PV08_10124 PV08_09165 PV08_09165 PV08_06893 PV08_06893 PV08_07874 PV08_07874 PV08_05757 PV08_05757 PV08_06133 PV08_06133 PV08_04037 PV08_04037 PV08_04238 PV08_04238 PV08_04388 PV08_04388 PV08_04666 PV08_04666 PV08_04977 PV08_04977 NOP7 NOP7 PV08_00787 PV08_00787 PV08_00857 PV08_00857 PV08_01405 PV08_01405 PV08_11804 PV08_11804 PV08_11422 PV08_11422 PV08_11404 PV08_11404 PV08_10553 PV08_10553 PV08_10670 PV08_10670 PV08_11002 PV08_11002 PV08_09342 PV08_09342 PV08_09454 PV08_09454 PV08_09459 PV08_09459 PV08_09264 PV08_09264 PV08_09906 PV08_09906 PV08_09931 PV08_09931 PV08_09817 PV08_09817 PV08_08466 PV08_08466 PV08_08591 PV08_08591 PV08_08317 PV08_08317 PV08_08573 PV08_08573 PV08_08869 PV08_08869 PV08_08733 PV08_08733 PV08_06741 PV08_06741 PV08_07362 PV08_07362 PV08_07785 PV08_07785 PV08_05298 PV08_05298 ERB1 ERB1 PV08_05658 PV08_05658 PV08_06111 PV08_06111 PV08_04284 PV08_04284 PV08_11970 PV08_11970 PV08_11346 PV08_11346 PV08_11351 PV08_11351 PV08_02481 PV08_02481 PV08_03084 PV08_03084 PV08_03139 PV08_03139 PV08_10941 PV08_10941 PV08_01257 PV08_01257 PV08_08612 PV08_08612 PV08_08617 PV08_08617 PV08_01564 PV08_01564 PV08_01815 PV08_01815 NAT10 NAT10 PV08_02020 PV08_02020 SPB1 SPB1 PV08_07273 PV08_07273 PV08_07318 PV08_07318 PV08_07766 PV08_07766 PV08_05490 PV08_05490 PV08_05657 PV08_05657 PV08_04914 PV08_04914 YTM1 YTM1 PV08_05034 PV08_05034 PV08_03133 PV08_03133 PV08_00879 PV08_00879 PV08_11782 PV08_11782 PV08_11379 PV08_11379 PV08_09537 PV08_09537 PV08_06657 PV08_06657 PV08_07425 PV08_07425 PV08_07490 PV08_07490 PV08_07878 PV08_07878 PV08_06102 PV08_06102 PV08_03935 PV08_03935 PV08_04136 PV08_04136 PV08_04467 PV08_04467 PV08_04670 PV08_04670 PV08_04926 PV08_04926 PV08_02348 PV08_02348 PV08_03155 PV08_03155 PV08_01901 PV08_01901 PV08_02021 PV08_02021 PV08_10838 PV08_10838
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_10124DRIM domain-containing protein. (2590 aa)
PV08_09165RNA helicase. (878 aa)
PV08_06893Uncharacterized protein. (938 aa)
PV08_07874HAD_SAK_1 domain-containing protein. (568 aa)
PV08_05757Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4840 aa)
PV08_06133WD_REPEATS_REGION domain-containing protein. (1505 aa)
PV08_0403718S rRNA biogenesis protein RCL1. (406 aa)
PV08_04238WD_REPEATS_REGION domain-containing protein. (960 aa)
PV08_04388Uncharacterized protein. (1030 aa)
PV08_04666WD_REPEATS_REGION domain-containing protein. (963 aa)
PV08_0497740S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (681 aa)
PV08_00787Brix domain-containing protein. (457 aa)
PV08_00857Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV08_01405WD_REPEATS_REGION domain-containing protein. (990 aa)
PV08_11804rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (397 aa)
PV08_11422Uncharacterized protein. (386 aa)
PV08_11404WD_REPEATS_REGION domain-containing protein. (443 aa)
PV08_10553Uncharacterized protein. (369 aa)
PV08_10670HMG box domain-containing protein. (325 aa)
PV08_11002WD_REPEATS_REGION domain-containing protein. (984 aa)
PV08_09342Brix domain-containing protein. (343 aa)
PV08_09454KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (335 aa)
PV08_09459Nop domain-containing protein. (517 aa)
PV08_09264Uncharacterized protein. (382 aa)
PV08_09906U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (290 aa)
PV08_09931Sas10 domain-containing protein. (605 aa)
PV08_09817Nucleolar protein 58. (632 aa)
PV08_08466PUM-HD domain-containing protein. (685 aa)
PV08_08591U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (743 aa)
PV08_08317Uncharacterized protein. (262 aa)
PV08_08573Kri1_C domain-containing protein. (601 aa)
PV08_08869Uncharacterized protein. (306 aa)
PV08_0873320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (442 aa)
PV08_06741Bms1-type G domain-containing protein. (811 aa)
PV08_07362NUC153 domain-containing protein. (717 aa)
PV08_07785CP-type G domain-containing protein. (549 aa)
PV08_0529840S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
PV08_0565860S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
PV08_06111Bms1-type G domain-containing protein. (1179 aa)
PV08_04284Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
PV08_11970Uncharacterized protein. (790 aa)
PV08_11346Brix domain-containing protein. (451 aa)
PV08_11351ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (480 aa)
PV08_02481WD_REPEATS_REGION domain-containing protein. (864 aa)
PV08_03084Uncharacterized protein. (710 aa)
PV08_03139rRNA 2'-O-methyltransferase fibrillarin. (324 aa)
PV08_10941Uncharacterized protein. (388 aa)
PV08_01257Uncharacterized protein. (1242 aa)
PV08_08612Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (274 aa)
PV08_08617Brix domain-containing protein. (296 aa)
PV08_01564Uncharacterized protein. (1823 aa)
PV08_01815RIO domain-containing protein. (382 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1129 aa)
PV08_02020Uncharacterized protein. (362 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
PV08_07273WD_REPEATS_REGION domain-containing protein. (557 aa)
PV08_07318WD_REPEATS_REGION domain-containing protein. (603 aa)
PV08_07766U3 small nucleolar RNA-associated protein 22. (1121 aa)
PV08_05490Uncharacterized protein; Belongs to the DEAD box helicase family. (793 aa)
PV08_05657Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
PV08_04914PINc domain-containing protein. (194 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
PV08_05034Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (583 aa)
PV08_03133Uncharacterized protein. (766 aa)
PV08_00879Uncharacterized protein. (513 aa)
PV08_11782Uncharacterized protein. (381 aa)
PV08_11379Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (437 aa)
PV08_09537Uncharacterized protein. (355 aa)
PV08_06657CBF domain-containing protein. (287 aa)
PV08_07425Ribosome biogenesis protein nsa2. (261 aa)
PV08_07490BUD22 domain-containing protein. (506 aa)
PV08_07878WD_REPEATS_REGION domain-containing protein. (533 aa)
PV08_0610240S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
PV08_03935Uncharacterized protein. (471 aa)
PV08_04136Uncharacterized protein. (900 aa)
PV08_04467Protein MAK16; Belongs to the MAK16 family. (327 aa)
PV08_04670WD_REPEATS_REGION domain-containing protein. (588 aa)
PV08_04926Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (221 aa)
PV08_02348Uncharacterized protein. (272 aa)
PV08_03155Uncharacterized protein. (296 aa)
PV08_01901S4 RNA-binding domain-containing protein. (188 aa)
PV08_02021Uncharacterized protein. (261 aa)
PV08_10838C2H2-type domain-containing protein. (113 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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