STRINGSTRING
PV08_11598 PV08_11598 URM1 URM1 PV08_10350 PV08_10350 PV08_06273 PV08_06273 PV08_11376 PV08_11376 PV08_08105 PV08_08105 PV08_07247 PV08_07247 PV08_00223 PV08_00223 PV08_01928 PV08_01928 PV08_05618 PV08_05618
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
PV08_11598Uncharacterized protein. (224 aa)
URM1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (105 aa)
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_06273Ubiquitin-like protein ATG12. (202 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_08105Ubiquitin-like domain-containing protein. (101 aa)
PV08_07247RRN7-type domain-containing protein. (628 aa)
PV08_00223Polyubiquitin. (305 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_05618Ubiquitin-60S ribosomal protein L40. (151 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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