6 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_00265	DNA-directed RNA polymerase. (193 aa)
	PV08_11001	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (86 aa)
	PV08_08398	Uncharacterized protein. (74 aa)
	PV08_04116	Uncharacterized protein. (327 aa)
	PV08_04513	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV08_00705	Uncharacterized protein. (152 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00265	PV08_00705	A0A0D1YWL0	A0A0D2BNM3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_04116	A0A0D1YWL0	A0A0D1YP46	DNA-directed RNA polymerase.	Uncharacterized protein.	0.978
PV08_00265	PV08_04513	A0A0D1YWL0	A0A0D1YQ14	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.998
PV08_00265	PV08_08398	A0A0D1YWL0	A0A0D1YDS8	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV08_00265	PV08_11001	A0A0D1YWL0	A0A0D2BK91	DNA-directed RNA polymerase.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.996
PV08_00705	PV08_00265	A0A0D2BNM3	A0A0D1YWL0	Uncharacterized protein.	DNA-directed RNA polymerase.	0.996
PV08_00705	PV08_04116	A0A0D2BNM3	A0A0D1YP46	Uncharacterized protein.	Uncharacterized protein.	0.969
PV08_00705	PV08_04513	A0A0D2BNM3	A0A0D1YQ14	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
PV08_00705	PV08_08398	A0A0D2BNM3	A0A0D1YDS8	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00705	PV08_11001	A0A0D2BNM3	A0A0D2BK91	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.999
PV08_04116	PV08_00265	A0A0D1YP46	A0A0D1YWL0	Uncharacterized protein.	DNA-directed RNA polymerase.	0.978
PV08_04116	PV08_00705	A0A0D1YP46	A0A0D2BNM3	Uncharacterized protein.	Uncharacterized protein.	0.969
PV08_04116	PV08_04513	A0A0D1YP46	A0A0D1YQ14	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.981
PV08_04116	PV08_08398	A0A0D1YP46	A0A0D1YDS8	Uncharacterized protein.	Uncharacterized protein.	0.934
PV08_04116	PV08_11001	A0A0D1YP46	A0A0D2BK91	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.945
PV08_04513	PV08_00265	A0A0D1YQ14	A0A0D1YWL0	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase.	0.998
PV08_04513	PV08_00705	A0A0D1YQ14	A0A0D2BNM3	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
PV08_04513	PV08_04116	A0A0D1YQ14	A0A0D1YP46	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.981
PV08_04513	PV08_08398	A0A0D1YQ14	A0A0D1YDS8	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
PV08_04513	PV08_11001	A0A0D1YQ14	A0A0D2BK91	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.998