61 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_02128	Uncharacterized protein. (1680 aa)
	PV08_05493	MPN domain-containing protein. (636 aa)
	PV08_07627	Nuclear cap-binding protein subunit 2. (180 aa)
	PV08_06918	Uncharacterized protein. (286 aa)
	PV08_08635	Uncharacterized protein. (368 aa)
	PV08_08094	Nup188_C domain-containing protein. (1820 aa)
	PV08_09371	Uncharacterized protein. (606 aa)
	PV08_09306	Nup54 domain-containing protein. (435 aa)
	PV08_11988	Uncharacterized protein. (681 aa)
	PV08_01851	RRM domain-containing protein. (447 aa)
	PV08_04272	TAP-C domain-containing protein. (430 aa)
	PV08_04262	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (357 aa)
	PV08_06001	SAP domain-containing protein. (264 aa)
	PV08_05981	HECT domain-containing protein. (4003 aa)
	PV08_05771	Peptidase S59 domain-containing protein. (1820 aa)
	PV08_07783	FHA domain-containing protein. (293 aa)
	PV08_07763	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (512 aa)
	PV08_08634	Uncharacterized protein. (943 aa)
	PV08_07993	Uncharacterized protein. (1244 aa)
	PV08_09310	TFIIS N-terminal domain-containing protein. (395 aa)
	PV08_10661	PCI domain-containing protein. (461 aa)
	PV08_07762	Uncharacterized protein. (1279 aa)
	PV08_10343	Uncharacterized protein. (448 aa)
	PV08_03132	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (97 aa)
	PV08_01412	Uncharacterized protein. (1119 aa)
	PV08_01271	Uncharacterized protein. (1598 aa)
	PV08_01024	Uncharacterized protein. (419 aa)
	PV08_02557	ABM domain-containing protein. (107 aa)
	PV08_05049	Uncharacterized protein. (732 aa)
	PV08_04506	Uncharacterized protein. (195 aa)
	PV08_06775	Uncharacterized protein; Belongs to the DEAD box helicase family. (518 aa)
	PV08_01484	Uncharacterized protein. (313 aa)
	PV08_08001	Uncharacterized protein. (91 aa)
	PV08_00518	RPOL4c domain-containing protein. (152 aa)
	PV08_00498	RRM domain-containing protein. (282 aa)
	PV08_00468	RanBD1 domain-containing protein. (506 aa)
	PV08_03655	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1046 aa)
	PV08_00176	Uncharacterized protein. (1363 aa)
	PV08_03456	WD_REPEATS_REGION domain-containing protein. (362 aa)
	PV08_07832	C3H1-type domain-containing protein. (629 aa)
	PV08_07847	Uncharacterized protein. (713 aa)
	PV08_04569	Uncharacterized protein. (480 aa)
	PV08_04835	Importin N-terminal domain-containing protein. (1097 aa)
	PV08_02621	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (461 aa)
	PV08_10937	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
	PV08_08260	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (929 aa)
	PV08_08581	WD_REPEATS_REGION domain-containing protein. (347 aa)
	PV08_08488	Uncharacterized protein. (580 aa)
	PV08_07307	Uncharacterized protein. (419 aa)
	PV08_07628	Uncharacterized protein. (925 aa)
	PV08_09131	RRM domain-containing protein. (252 aa)
	PV08_09065	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (777 aa)
	PV08_10468	Nsp1_C domain-containing protein. (657 aa)
	PV08_11207	Uncharacterized protein. (842 aa)
	PV08_11407	Uncharacterized protein. (571 aa)
	PV08_11941	Uncharacterized protein. (1346 aa)
	PV08_01294	Uncharacterized protein. (211 aa)
	PV08_00216	Uncharacterized protein. (1126 aa)
	PV08_03840	ATP-dependent RNA helicase sub2. (440 aa)
	PV08_03780	Uncharacterized protein. (2322 aa)
	PV08_06168	NUP214 domain-containing protein. (1507 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00176	PV08_00216	A0A0D2BKY2	A0A0D2A470	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_00468	A0A0D2BKY2	A0A0D2BLS3	Uncharacterized protein.	RanBD1 domain-containing protein.	0.926
PV08_00176	PV08_00498	A0A0D2BKY2	A0A0D2BLV0	Uncharacterized protein.	RRM domain-containing protein.	0.752
PV08_00176	PV08_01024	A0A0D2BKY2	A0A0D2CA66	Uncharacterized protein.	Uncharacterized protein.	0.744
PV08_00176	PV08_01271	A0A0D2BKY2	A0A0D2CAU0	Uncharacterized protein.	Uncharacterized protein.	0.424
PV08_00176	PV08_02128	A0A0D2BKY2	A0A0D2BR97	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_02621	A0A0D2BKY2	A0A0D2BH63	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.994
PV08_00176	PV08_03132	A0A0D2BKY2	A0A0D2BIT6	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.571
PV08_00176	PV08_03456	A0A0D2BKY2	A0A0D2BJS0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.990
PV08_00176	PV08_03780	A0A0D2BKY2	A0A0D1ZV49	Uncharacterized protein.	Uncharacterized protein.	0.525
PV08_00176	PV08_03840	A0A0D2BKY2	A0A0D1ZV95	Uncharacterized protein.	ATP-dependent RNA helicase sub2.	0.528
PV08_00176	PV08_04262	A0A0D2BKY2	A0A0D1YPG9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.985
PV08_00176	PV08_04272	A0A0D2BKY2	A0A0D1YPH6	Uncharacterized protein.	TAP-C domain-containing protein.	0.830
PV08_00176	PV08_04569	A0A0D2BKY2	A0A0D2BFJ1	Uncharacterized protein.	Uncharacterized protein.	0.883
PV08_00176	PV08_04835	A0A0D2BKY2	A0A0D2BG89	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.499
PV08_00176	PV08_05771	A0A0D2BKY2	A0A0D1YL06	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
PV08_00176	PV08_06168	A0A0D2BKY2	A0A0D1ZTL3	Uncharacterized protein.	NUP214 domain-containing protein.	0.986
PV08_00176	PV08_07762	A0A0D2BKY2	A0A0D2B8I7	Uncharacterized protein.	Uncharacterized protein.	0.768
PV08_00176	PV08_07763	A0A0D2BKY2	A0A0D1YJ66	Uncharacterized protein.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.531
PV08_00176	PV08_07832	A0A0D2BKY2	A0A0D2B8S2	Uncharacterized protein.	C3H1-type domain-containing protein.	0.651