53 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_06394	Uncharacterized protein. (1027 aa)
	PV08_02184	Uncharacterized protein. (418 aa)
	PV08_00258	Protein kinase domain-containing protein. (1057 aa)
	PV08_07826	Uncharacterized protein. (362 aa)
	PV08_07564	HORMA domain-containing protein. (440 aa)
	PV08_01970	SUN domain-containing protein. (625 aa)
	PV08_09505	ERCC4 domain-containing protein. (659 aa)
	PV08_00528	Uncharacterized protein. (218 aa)
	PV08_00047	Csm1 domain-containing protein. (496 aa)
	PV08_03499	Uncharacterized protein. (1306 aa)
	PV08_10840	Uncharacterized protein. (810 aa)
	PV08_03092	Uncharacterized protein. (307 aa)
	PV08_11523	ERCC4 domain-containing protein. (615 aa)
	PV08_11418	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1668 aa)
	PV08_04905	DNA_MISMATCH_REPAIR_2 domain-containing protein. (990 aa)
	PV08_04747	Uncharacterized protein. (206 aa)
	PV08_03791	Uncharacterized protein. (213 aa)
	PV08_06094	Uncharacterized protein. (417 aa)
	PV08_07845	DUF1767 domain-containing protein. (291 aa)
	PV08_07825	Uncharacterized protein. (77 aa)
	PV08_06879	Protein kinase domain-containing protein. (294 aa)
	PV08_08227	Uncharacterized protein. (378 aa)
	PV08_08180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (371 aa)
	PV08_09496	Uncharacterized protein. (110 aa)
	PV08_09171	DNA_mis_repair domain-containing protein. (764 aa)
	PV08_10374	Plus3 domain-containing protein. (611 aa)
	PV08_11926	Ribosomal protein L32. (417 aa)
	PV08_01792	HTH APSES-type domain-containing protein. (397 aa)
	PV08_01661	Uncharacterized protein. (596 aa)
	PV08_05092	MutL_C domain-containing protein. (897 aa)
	PV08_05027	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1247 aa)
	PV08_04892	FHA domain-containing protein. (854 aa)
	PV08_04857	Uncharacterized protein. (585 aa)
	PV08_06258	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (617 aa)
	PV08_06173	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	PV08_08818	RECA_2 domain-containing protein. (447 aa)
	PV08_11024	Uncharacterized protein. (939 aa)
	PV08_11329	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)
	PV08_00250	DNA_mis_repair domain-containing protein. (940 aa)
	PV08_02328	TP6A_N domain-containing protein. (391 aa)
	PV08_04533	PH domain-containing protein. (1514 aa)
	PV08_04292	Uncharacterized protein. (179 aa)
	PV08_03991	RECA_2 domain-containing protein. (483 aa)
	PV08_05467	Uncharacterized protein. (323 aa)
	PV08_07566	Uncharacterized protein. (1835 aa)
	PV08_08812	Uncharacterized protein. (637 aa)
	PV08_08323	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (625 aa)
	PV08_08028	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (768 aa)
	PV08_09929	DNA_MISMATCH_REPAIR_2 domain-containing protein. (894 aa)
	PV08_09598	Uncharacterized protein. (531 aa)
	PV08_10963	Uncharacterized protein. (245 aa)
	PV08_10225	Protein kinase domain-containing protein. (574 aa)
	PV08_11283	ERCC4 domain-containing protein. (944 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00047	PV08_04857	A0A0D2BLN9	A0A0D1ZYD6	Csm1 domain-containing protein.	Uncharacterized protein.	0.927
PV08_00047	PV08_06879	A0A0D2BLN9	A0A0D2B5C9	Csm1 domain-containing protein.	Protein kinase domain-containing protein.	0.494
PV08_00047	PV08_08180	A0A0D2BLN9	A0A0D2B295	Csm1 domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.494
PV08_00047	PV08_08812	A0A0D2BLN9	A0A0D1YEY2	Csm1 domain-containing protein.	Uncharacterized protein.	0.458
PV08_00250	PV08_02184	A0A0D1YWJ6	A0A0D2CDJ4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.409
PV08_00250	PV08_03991	A0A0D1YWJ6	A0A0D1YNU8	DNA_mis_repair domain-containing protein.	RECA_2 domain-containing protein.	0.486
PV08_00250	PV08_04905	A0A0D1YWJ6	A0A0D2BGE0	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.943
PV08_00250	PV08_05027	A0A0D1YWJ6	A0A0D1ZYT8	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.975
PV08_00250	PV08_05092	A0A0D1YWJ6	A0A0D1ZZ12	DNA_mis_repair domain-containing protein.	MutL_C domain-containing protein.	0.739
PV08_00250	PV08_06094	A0A0D1YWJ6	A0A0D2BAS2	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.409
PV08_00250	PV08_06173	A0A0D1YWJ6	A0A0D1ZTL9	DNA_mis_repair domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.631
PV08_00250	PV08_06394	A0A0D1YWJ6	A0A0D2BBF7	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.803
PV08_00250	PV08_07566	A0A0D1YWJ6	A0A0D1YIL6	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.409
PV08_00250	PV08_08227	A0A0D1YWJ6	A0A0D2B375	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.459
PV08_00250	PV08_08818	A0A0D1YWJ6	A0A0D1ZLD2	DNA_mis_repair domain-containing protein.	RECA_2 domain-containing protein.	0.454
PV08_00250	PV08_09171	A0A0D1YWJ6	A0A0D2AYW2	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.989
PV08_00250	PV08_09929	A0A0D1YWJ6	A0A0D1YCJ8	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.945
PV08_00250	PV08_11329	A0A0D1YWJ6	A0A0D1ZBF2	DNA_mis_repair domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.653
PV08_00250	PV08_11523	A0A0D1YWJ6	A0A0D2BGV8	DNA_mis_repair domain-containing protein.	ERCC4 domain-containing protein.	0.426
PV08_00258	PV08_01970	A0A0D2C7X5	A0A0D2BSI4	Protein kinase domain-containing protein.	SUN domain-containing protein.	0.771