17 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_10289	Rad51 domain-containing protein. (519 aa)
	PV08_05144	Uncharacterized protein. (661 aa)
	PV08_03499	Uncharacterized protein. (1306 aa)
	PV08_04905	DNA_MISMATCH_REPAIR_2 domain-containing protein. (990 aa)
	PV08_04035	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1006 aa)
	PV08_06206	Uncharacterized protein. (385 aa)
	PV08_06394	Uncharacterized protein. (1027 aa)
	PV08_09171	DNA_mis_repair domain-containing protein. (764 aa)
	PV08_05092	MutL_C domain-containing protein. (897 aa)
	PV08_05027	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1247 aa)
	PV08_04922	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1093 aa)
	PV08_09929	DNA_MISMATCH_REPAIR_2 domain-containing protein. (894 aa)
	PV08_03991	RECA_2 domain-containing protein. (483 aa)
	PV08_08818	RECA_2 domain-containing protein. (447 aa)
	PV08_10647	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). (926 aa)
	PV08_00250	DNA_mis_repair domain-containing protein. (940 aa)
	PV08_11329	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00250	PV08_03991	A0A0D1YWJ6	A0A0D1YNU8	DNA_mis_repair domain-containing protein.	RECA_2 domain-containing protein.	0.486
PV08_00250	PV08_04035	A0A0D1YWJ6	A0A0D2BE23	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.965
PV08_00250	PV08_04905	A0A0D1YWJ6	A0A0D2BGE0	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.943
PV08_00250	PV08_04922	A0A0D1YWJ6	A0A0D1ZYJ0	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.947
PV08_00250	PV08_05027	A0A0D1YWJ6	A0A0D1ZYT8	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.975
PV08_00250	PV08_05092	A0A0D1YWJ6	A0A0D1ZZ12	DNA_mis_repair domain-containing protein.	MutL_C domain-containing protein.	0.739
PV08_00250	PV08_05144	A0A0D1YWJ6	A0A0D2C2W4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.927
PV08_00250	PV08_06394	A0A0D1YWJ6	A0A0D2BBF7	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.803
PV08_00250	PV08_08818	A0A0D1YWJ6	A0A0D1ZLD2	DNA_mis_repair domain-containing protein.	RECA_2 domain-containing protein.	0.454
PV08_00250	PV08_09171	A0A0D1YWJ6	A0A0D2AYW2	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.989
PV08_00250	PV08_09929	A0A0D1YWJ6	A0A0D1YCJ8	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.945
PV08_00250	PV08_10647	A0A0D1YWJ6	A0A0D1ZEB6	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).	0.980
PV08_00250	PV08_11329	A0A0D1YWJ6	A0A0D1ZBF2	DNA_mis_repair domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.653
PV08_03499	PV08_03991	A0A0D2BKS6	A0A0D1YNU8	Uncharacterized protein.	RECA_2 domain-containing protein.	0.883
PV08_03499	PV08_04922	A0A0D2BKS6	A0A0D1ZYJ0	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.408
PV08_03499	PV08_08818	A0A0D2BKS6	A0A0D1ZLD2	Uncharacterized protein.	RECA_2 domain-containing protein.	0.852
PV08_03499	PV08_10289	A0A0D2BKS6	A0A0D2AX51	Uncharacterized protein.	Rad51 domain-containing protein.	0.706
PV08_03499	PV08_11329	A0A0D2BKS6	A0A0D1ZBF2	Uncharacterized protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.917
PV08_03991	PV08_00250	A0A0D1YNU8	A0A0D1YWJ6	RECA_2 domain-containing protein.	DNA_mis_repair domain-containing protein.	0.486
PV08_03991	PV08_03499	A0A0D1YNU8	A0A0D2BKS6	RECA_2 domain-containing protein.	Uncharacterized protein.	0.883