89 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_04603	F-box domain-containing protein. (508 aa)
	PV08_11410	Uncharacterized protein. (161 aa)
	PV08_09275	F-box domain-containing protein. (710 aa)
	PV08_09517	WD_REPEATS_REGION domain-containing protein. (508 aa)
	PV08_07853	RBR-type E3 ubiquitin transferase. (988 aa)
	PV08_05397	WD_REPEATS_REGION domain-containing protein. (705 aa)
	PV08_05584	E3 ubiquitin protein ligase. (705 aa)
	PV08_05644	F-box domain-containing protein. (553 aa)
	PV08_06458	F-box domain-containing protein. (677 aa)
	PV08_06546	F-box domain-containing protein. (740 aa)
	PV08_03925	Uncharacterized protein. (1466 aa)
	PV08_04302	RING-type domain-containing protein. (647 aa)
	PV08_04610	Uncharacterized protein. (337 aa)
	PV08_04901	Uncharacterized protein. (545 aa)
	PV08_04921	Uncharacterized protein. (621 aa)
	PV08_05016	RBR-type E3 ubiquitin transferase. (457 aa)
	PV08_02353	Uncharacterized protein. (575 aa)
	PV08_02689	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1088 aa)
	PV08_00436	CUE domain-containing protein. (198 aa)
	PV08_00496	WD_REPEATS_REGION domain-containing protein. (567 aa)
	PV08_00621	Uncharacterized protein. (558 aa)
	PV08_01006	Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	PV08_01625	CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
	PV08_02181	RING-type domain-containing protein. (770 aa)
	PV08_09331	Sulfatase domain-containing protein. (631 aa)
	PV08_07954	Uncharacterized protein. (472 aa)
	PV08_08289	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (349 aa)
	PV08_06627	Uncharacterized protein. (1133 aa)
	PV08_07652	Uncharacterized protein. (678 aa)
	PV08_05972	Uncharacterized protein. (595 aa)
	PV08_06531	CULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
	PV08_03815	RING-box protein 1. (125 aa)
	PV08_04902	Uncharacterized protein. (803 aa)
	PV08_02329	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
	PV08_02595	Uncharacterized protein. (630 aa)
	PV08_03056	Uncharacterized protein. (829 aa)
	PV08_00064	Uncharacterized protein. (226 aa)
	PV08_00326	Uncharacterized protein. (208 aa)
	PV08_00922	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (115 aa)
	PV08_01330	Uncharacterized protein. (274 aa)
	PV08_11402	RING-type domain-containing protein. (744 aa)
	PV08_11362	UBIQUITIN_CONJUGAT_2 domain-containing protein. (331 aa)
	PV08_10129	CULLIN_2 domain-containing protein; Belongs to the cullin family. (823 aa)
	PV08_10653	RBR-type E3 ubiquitin transferase. (642 aa)
	PV08_10990	UBX domain-containing protein. (508 aa)
	PV08_09810	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
	PV08_09797	Uncharacterized protein. (587 aa)
	PV08_08055	Uncharacterized protein. (721 aa)
	PV08_08440	F-box domain-containing protein. (959 aa)
	PV08_08561	Uncharacterized protein. (721 aa)
	PV08_08787	DOC domain-containing protein. (363 aa)
	PV08_06874	Uncharacterized protein. (295 aa)
	PV08_07352	Sulfatase domain-containing protein. (615 aa)
	PV08_05243	Uncharacterized protein. (609 aa)
	PV08_05323	Uncharacterized protein. (493 aa)
	PV08_07857	Rhomboid domain-containing protein. (285 aa)
	PV08_05200	RING-type domain-containing protein. (426 aa)
	PV08_05310	Uncharacterized protein. (648 aa)
	PV08_05340	Uncharacterized protein. (712 aa)
	PV08_05641	CULLIN_2 domain-containing protein; Belongs to the cullin family. (734 aa)
	PV08_04194	F-box domain-containing protein. (1351 aa)
	PV08_11715	Amidohydro_3 domain-containing protein. (99 aa)
	PV08_04517	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (315 aa)
	PV08_04694	Uncharacterized protein. (675 aa)
	PV08_04900	Uncharacterized protein. (419 aa)
	PV08_02335	TPR_REGION domain-containing protein. (775 aa)
	PV08_03353	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (520 aa)
	PV08_00131	IBR domain-containing protein. (643 aa)
	PV08_03544	Uncharacterized protein. (946 aa)
	PV08_00302	DUF1746 domain-containing protein. (257 aa)
	PV08_03700	F-box domain-containing protein. (562 aa)
	PV08_00568	RING-type domain-containing protein. (859 aa)
	PV08_01178	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (254 aa)
	PV08_08502	Uncharacterized protein. (376 aa)
	PV08_01267	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (264 aa)
	PV08_08855	ANK_REP_REGION domain-containing protein. (517 aa)
	PV08_02033	Uncharacterized protein. (204 aa)
	PV08_01559	Uncharacterized protein. (417 aa)
	PV08_01990	RING-type domain-containing protein. (456 aa)
	PV08_02085	DNA repair protein rad18. (478 aa)
	PV08_07243	Uncharacterized protein. (2087 aa)
	PV08_07263	Uncharacterized protein. (942 aa)
	PV08_07756	F-box domain-containing protein. (614 aa)
	PV08_07846	Uncharacterized protein. (1996 aa)
	PV08_05682	Uncharacterized protein. (316 aa)
	PV08_05969	Uncharacterized protein. (613 aa)
	PV08_06215	Uncharacterized protein. (1270 aa)
	PV08_03882	Autophagy-related protein 3. (372 aa)
	PV08_03583	Uncharacterized protein. (907 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00064	PV08_02033	A0A0D2A3P9	A0A0D2BR28	Uncharacterized protein.	Uncharacterized protein.	0.450
PV08_00302	PV08_06874	A0A0D2BL92	A0A0D2B5C5	DUF1746 domain-containing protein.	Uncharacterized protein.	0.742
PV08_00436	PV08_02329	A0A0D1YX38	A0A0D1ZZE5	CUE domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.862
PV08_00496	PV08_04694	A0A0D1YXB8	A0A0D2BG02	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.789
PV08_00496	PV08_05243	A0A0D1YXB8	A0A0D2B8E2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.789
PV08_00496	PV08_11402	A0A0D1YXB8	A0A0D2AUN1	WD_REPEATS_REGION domain-containing protein.	RING-type domain-containing protein.	0.789
PV08_00568	PV08_01006	A0A0D2BM57	A0A0D1YYR5	RING-type domain-containing protein.	Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.516
PV08_00568	PV08_01267	A0A0D2BM57	A0A0D2BQC3	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.994
PV08_00568	PV08_02329	A0A0D2BM57	A0A0D1ZZE5	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.963
PV08_00568	PV08_03353	A0A0D2BM57	A0A0D2BJJ1	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.516
PV08_00568	PV08_03583	A0A0D2BM57	A0A0D2C6T1	RING-type domain-containing protein.	Uncharacterized protein.	0.995
PV08_00568	PV08_04517	A0A0D2BM57	A0A0D2BFC9	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.995
PV08_00568	PV08_06874	A0A0D2BM57	A0A0D2B5C5	RING-type domain-containing protein.	Uncharacterized protein.	0.737
PV08_00568	PV08_10990	A0A0D2BM57	A0A0D2AY97	RING-type domain-containing protein.	UBX domain-containing protein.	0.830
PV08_00922	PV08_02335	A0A0D2A6D1	A0A0D2BGF2	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	TPR_REGION domain-containing protein.	0.415
PV08_00922	PV08_03815	A0A0D2A6D1	A0A0D1ZV76	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	RING-box protein 1.	0.898
PV08_00922	PV08_06531	A0A0D2A6D1	A0A0D1ZUR1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.846
PV08_00922	PV08_10129	A0A0D2A6D1	A0A0D2AWG2	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.846
PV08_01006	PV08_00568	A0A0D1YYR5	A0A0D2BM57	Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.516
PV08_01006	PV08_01178	A0A0D1YYR5	A0A0D2BNX4	Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.671