45 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_09645	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (423 aa)
	PV08_09592	RING-type domain-containing protein. (265 aa)
	PV08_09911	Uncharacterized protein. (271 aa)
	PV08_08496	Uncharacterized protein. (270 aa)
	PV08_06864	Uncharacterized protein. (541 aa)
	PV08_07242	Uncharacterized protein. (704 aa)
	PV08_11580	Uncharacterized protein. (613 aa)
	PV08_08398	Uncharacterized protein. (74 aa)
	PV08_06432	TFIIE beta domain-containing protein. (231 aa)
	PV08_00225	Acyl_transf_3 domain-containing protein. (372 aa)
	PV08_00941	Uncharacterized protein. (301 aa)
	PV08_01121	Uncharacterized protein. (1215 aa)
	PV08_01510	BTP domain-containing protein. (233 aa)
	PV08_01525	Uncharacterized protein. (505 aa)
	PV08_01986	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
	PV08_10291	TAF8_C domain-containing protein. (309 aa)
	PV08_10537	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
	PV08_09180	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (241 aa)
	PV08_08139	Uncharacterized protein. (384 aa)
	PV08_06873	BSD domain-containing protein. (630 aa)
	PV08_02460	Uncharacterized protein. (768 aa)
	PV08_01340	RNA_pol_L_2 domain-containing protein. (243 aa)
	PV08_01511	TAFII55_N domain-containing protein. (764 aa)
	PV08_01531	DUF4211 domain-containing protein. (731 aa)
	PV08_01987	Uncharacterized protein. (343 aa)
	PV08_11926	Ribosomal protein L32. (417 aa)
	PV08_10187	Uncharacterized protein. (416 aa)
	PV08_10374	Plus3 domain-containing protein. (611 aa)
	PV08_09062	RPOLD domain-containing protein. (334 aa)
	PV08_08930	TAF domain-containing protein. (450 aa)
	PV08_02113	Protein kinase domain-containing protein. (947 aa)
	PV08_07811	Acyl_transf_3 domain-containing protein. (499 aa)
	PV08_05224	Uncharacterized protein. (490 aa)
	PV08_03558	Uncharacterized protein. (376 aa)
	PV08_00404	Uncharacterized protein. (540 aa)
	PV08_07309	DUF3591 domain-containing protein. (1129 aa)
	PV08_06284	HTH TFE/IIEalpha-type domain-containing protein. (514 aa)
	PV08_03843	Uncharacterized protein. (217 aa)
	PV08_03909	CYCLIN domain-containing protein; Belongs to the cyclin family. (376 aa)
	PV08_02372	Uncharacterized protein. (843 aa)
	PV08_02977	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (459 aa)
	PV08_00095	CDC73_C domain-containing protein. (444 aa)
	PV08_00368	TFIID_20kDa domain-containing protein. (572 aa)
	PV08_09353	TAFII28 domain-containing protein. (373 aa)
	PV08_00122	Uncharacterized protein. (1262 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00095	PV08_00404	A0A0D2BKS5	A0A0D2C8E2	CDC73_C domain-containing protein.	Uncharacterized protein.	0.999
PV08_00095	PV08_01121	A0A0D2BKS5	A0A0D1YZ56	CDC73_C domain-containing protein.	Uncharacterized protein.	0.999
PV08_00095	PV08_01340	A0A0D2BKS5	A0A0D2A7J8	CDC73_C domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.921
PV08_00095	PV08_05224	A0A0D2BKS5	A0A0D2BV93	CDC73_C domain-containing protein.	Uncharacterized protein.	0.999
PV08_00095	PV08_08139	A0A0D2BKS5	A0A0D1ZJF2	CDC73_C domain-containing protein.	Uncharacterized protein.	0.457
PV08_00095	PV08_08398	A0A0D2BKS5	A0A0D1YDS8	CDC73_C domain-containing protein.	Uncharacterized protein.	0.906
PV08_00095	PV08_09062	A0A0D2BKS5	A0A0D2AZ98	CDC73_C domain-containing protein.	RPOLD domain-containing protein.	0.931
PV08_00095	PV08_10374	A0A0D2BKS5	A0A0D2AXD5	CDC73_C domain-containing protein.	Plus3 domain-containing protein.	0.995
PV08_00095	PV08_11580	A0A0D2BKS5	A0A0D1Y6W4	CDC73_C domain-containing protein.	Uncharacterized protein.	0.969
PV08_00095	PV08_11926	A0A0D2BKS5	A0A0D2ATH4	CDC73_C domain-containing protein.	Ribosomal protein L32.	0.999
PV08_00122	PV08_00225	A0A0D2BLW3	A0A0D1YWH6	Uncharacterized protein.	Acyl_transf_3 domain-containing protein.	0.969
PV08_00122	PV08_00368	A0A0D2BLW3	A0A0D2BLG4	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.999
PV08_00122	PV08_00941	A0A0D2BLW3	A0A0D1YYK2	Uncharacterized protein.	Uncharacterized protein.	0.946
PV08_00122	PV08_01340	A0A0D2BLW3	A0A0D2A7J8	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.839
PV08_00122	PV08_01510	A0A0D2BLW3	A0A0D1Z048	Uncharacterized protein.	BTP domain-containing protein.	0.943
PV08_00122	PV08_01511	A0A0D2BLW3	A0A0D2A829	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.999
PV08_00122	PV08_01525	A0A0D2BLW3	A0A0D1Z066	Uncharacterized protein.	Uncharacterized protein.	0.954
PV08_00122	PV08_01531	A0A0D2BLW3	A0A0D2A854	Uncharacterized protein.	DUF4211 domain-containing protein.	0.946
PV08_00122	PV08_01986	A0A0D2BLW3	A0A0D1Z171	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.854
PV08_00122	PV08_01987	A0A0D2BLW3	A0A0D2A9G3	Uncharacterized protein.	Uncharacterized protein.	0.854