18 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_11002	WD_REPEATS_REGION domain-containing protein. (984 aa)
	PV08_09454	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (335 aa)
	PV08_09906	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (290 aa)
	PV08_09931	Sas10 domain-containing protein. (605 aa)
	PV08_01683	Uncharacterized protein. (884 aa)
	PV08_04914	PINc domain-containing protein. (194 aa)
	PV08_10124	DRIM domain-containing protein. (2590 aa)
	PV08_10119	Uncharacterized protein. (597 aa)
	PV08_11404	WD_REPEATS_REGION domain-containing protein. (443 aa)
	PV08_04977	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
	PV08_06893	Uncharacterized protein. (938 aa)
	PV08_09165	RNA helicase. (878 aa)
	PV08_04670	WD_REPEATS_REGION domain-containing protein. (588 aa)
	PV08_07273	WD_REPEATS_REGION domain-containing protein. (557 aa)
	PV08_01564	Uncharacterized protein. (1823 aa)
	PV08_01257	Uncharacterized protein. (1242 aa)
	PV08_03828	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (765 aa)
	PV08_08869	Uncharacterized protein. (306 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_01257	PV08_01564	A0A0D2BQA9	A0A0D2BRE7	Uncharacterized protein.	Uncharacterized protein.	0.992
PV08_01257	PV08_03828	A0A0D2BQA9	A0A0D2BDE9	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.906
PV08_01257	PV08_04670	A0A0D2BQA9	A0A0D1YQH6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.970
PV08_01257	PV08_04914	A0A0D2BQA9	A0A0D2C236	Uncharacterized protein.	PINc domain-containing protein.	0.943
PV08_01257	PV08_04977	A0A0D2BQA9	A0A0D1ZYN6	Uncharacterized protein.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.762
PV08_01257	PV08_06893	A0A0D2BQA9	A0A0D1ZMR5	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_01257	PV08_07273	A0A0D2BQA9	A0A0D2BTD2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
PV08_01257	PV08_08869	A0A0D2BQA9	A0A0D2B411	Uncharacterized protein.	Uncharacterized protein.	0.767
PV08_01257	PV08_09165	A0A0D2BQA9	A0A0D1ZFY5	Uncharacterized protein.	RNA helicase.	0.935
PV08_01257	PV08_09454	A0A0D2BQA9	A0A0D2AZM7	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.992
PV08_01257	PV08_09906	A0A0D2BQA9	A0A0D2B144	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.971
PV08_01257	PV08_09931	A0A0D2BQA9	A0A0D2B160	Uncharacterized protein.	Sas10 domain-containing protein.	0.994
PV08_01257	PV08_10119	A0A0D2BQA9	A0A0D2AWE7	Uncharacterized protein.	Uncharacterized protein.	0.887
PV08_01257	PV08_10124	A0A0D2BQA9	A0A0D2AWF4	Uncharacterized protein.	DRIM domain-containing protein.	0.981
PV08_01257	PV08_11002	A0A0D2BQA9	A0A0D2AZ08	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.966
PV08_01257	PV08_11404	A0A0D2BQA9	A0A0D2AVH5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.975
PV08_01564	PV08_01257	A0A0D2BRE7	A0A0D2BQA9	Uncharacterized protein.	Uncharacterized protein.	0.992
PV08_01564	PV08_01683	A0A0D2BRE7	A0A0D2CC96	Uncharacterized protein.	Uncharacterized protein.	0.619
PV08_01564	PV08_03828	A0A0D2BRE7	A0A0D2BDE9	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.993
PV08_01564	PV08_04670	A0A0D2BRE7	A0A0D1YQH6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991