22 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_00271	Thymidylate synthase. (387 aa)
	PV08_03191	Uncharacterized protein. (820 aa)
	PV08_03926	Uncharacterized protein. (807 aa)
	PV08_08958	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (152 aa)
	PV08_08903	Glutamine amidotransferase type-1 domain-containing protein. (258 aa)
	PV08_09599	Uncharacterized protein. (221 aa)
	PV08_02404	Glutamine amidotransferase type-1 domain-containing protein. (250 aa)
	PV08_02368	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (702 aa)
	PV08_05629	Uncharacterized protein. (112 aa)
	PV08_04231	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (536 aa)
	PV08_05063	Uncharacterized protein. (225 aa)
	PV08_03456	WD_REPEATS_REGION domain-containing protein. (362 aa)
	PV08_03514	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (751 aa)
	PV08_09273	Uncharacterized protein. (732 aa)
	PV08_09363	PPIase cyclophilin-type domain-containing protein. (563 aa)
	PV08_00660	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1138 aa)
	PV08_01958	SAC domain-containing protein. (1065 aa)
	PV08_06080	Uncharacterized protein. (294 aa)
	PV08_03003	Uncharacterized protein. (473 aa)
	PV08_01420	Glutamine amidotransferase type-1 domain-containing protein. (277 aa)
	PV08_09264	Uncharacterized protein. (382 aa)
	PV08_07847	Uncharacterized protein. (713 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00271	PV08_02368	A0A0D2A4C1	A0A0D1YS75	Thymidylate synthase.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.654
PV08_02368	PV08_00271	A0A0D1YS75	A0A0D2A4C1	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Thymidylate synthase.	0.654
PV08_02368	PV08_03514	A0A0D1YS75	A0A0D2BKU1	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	0.653
PV08_02368	PV08_05063	A0A0D1YS75	A0A0D2BFT2	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Uncharacterized protein.	0.935
PV08_02368	PV08_09264	A0A0D1YS75	A0A0D2AZZ6	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Uncharacterized protein.	0.993
PV08_03456	PV08_09363	A0A0D2BJS0	A0A0D2BLP0	WD_REPEATS_REGION domain-containing protein.	PPIase cyclophilin-type domain-containing protein.	0.534
PV08_03514	PV08_02368	A0A0D2BKU1	A0A0D1YS75	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.653
PV08_03514	PV08_09264	A0A0D2BKU1	A0A0D2AZZ6	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	Uncharacterized protein.	0.477
PV08_05063	PV08_02368	A0A0D2BFT2	A0A0D1YS75	Uncharacterized protein.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.935
PV08_05063	PV08_09264	A0A0D2BFT2	A0A0D2AZZ6	Uncharacterized protein.	Uncharacterized protein.	0.953
PV08_09264	PV08_02368	A0A0D2AZZ6	A0A0D1YS75	Uncharacterized protein.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.993
PV08_09264	PV08_03514	A0A0D2AZZ6	A0A0D2BKU1	Uncharacterized protein.	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	0.477
PV08_09264	PV08_05063	A0A0D2AZZ6	A0A0D2BFT2	Uncharacterized protein.	Uncharacterized protein.	0.953
PV08_09363	PV08_03456	A0A0D2BLP0	A0A0D2BJS0	PPIase cyclophilin-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.534