(13 nodes) Aminotransferase class-III network (Exophiala spinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_03477	Uncharacterized protein. (718 aa)
	PV08_06144	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (466 aa)
	PV08_06036	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
	PV08_05920	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (475 aa)
	PV08_09850	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (453 aa)
	PV08_03233	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)
	PV08_11980	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (498 aa)
	PV08_04899	Dethiobiotin synthase. (834 aa)
	PV08_04673	Ornithine aminotransferase. (485 aa)
	PV08_03777	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (433 aa)
	PV08_05284	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (489 aa)
	PV08_02390	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (466 aa)
	PV08_09760	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (516 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_02390	PV08_03777	A0A0D2BGJ0	A0A0D2BZ61	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.468
PV08_02390	PV08_06036	A0A0D2BGJ0	A0A0D2BBM2	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.709
PV08_02390	PV08_09760	A0A0D2BGJ0	A0A0D2B0P7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.709
PV08_03233	PV08_06036	A0A0D2C5W9	A0A0D2BBM2	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.428
PV08_03233	PV08_09760	A0A0D2C5W9	A0A0D2B0P7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.428
PV08_03477	PV08_05920	A0A0D2BJT7	A0A0D2BB76	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.414
PV08_03477	PV08_06036	A0A0D2BJT7	A0A0D2BBM2	Uncharacterized protein.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.542
PV08_03477	PV08_09760	A0A0D2BJT7	A0A0D2B0P7	Uncharacterized protein.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.542
PV08_03777	PV08_02390	A0A0D2BZ61	A0A0D2BGJ0	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.468
PV08_03777	PV08_06036	A0A0D2BZ61	A0A0D2BBM2	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.688
PV08_03777	PV08_06144	A0A0D2BZ61	A0A0D2BAV1	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.472
PV08_03777	PV08_09760	A0A0D2BZ61	A0A0D2B0P7	4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.688
PV08_04673	PV08_06036	A0A0D2C1B6	A0A0D2BBM2	Ornithine aminotransferase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.662
PV08_04673	PV08_09760	A0A0D2C1B6	A0A0D2B0P7	Ornithine aminotransferase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.662
PV08_04899	PV08_06036	A0A0D2C224	A0A0D2BBM2	Dethiobiotin synthase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.438
PV08_04899	PV08_09760	A0A0D2C224	A0A0D2B0P7	Dethiobiotin synthase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.438
PV08_05284	PV08_05920	A0A0D2BVE0	A0A0D2BB76	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.427
PV08_05284	PV08_06036	A0A0D2BVE0	A0A0D2BBM2	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.542
PV08_05284	PV08_09760	A0A0D2BVE0	A0A0D2B0P7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.542
PV08_05920	PV08_03477	A0A0D2BB76	A0A0D2BJT7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.414