5 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_05618	Ubiquitin-60S ribosomal protein L40. (151 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_11995	Ubiquitin-like domain-containing protein. (1124 aa)
	PV08_10726	Ubiquitin-like domain-containing protein. (914 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_05618	A0A0D2C7U5	A0A0D2BAH6	Polyubiquitin.	Ubiquitin-60S ribosomal protein L40.	0.975
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11995	A0A0D2C7U5	A0A0D2BEU4	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.825
PV08_05618	PV08_00223	A0A0D2BAH6	A0A0D2C7U5	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin.	0.975
PV08_05618	PV08_10350	A0A0D2BAH6	A0A0D1Y801	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_05618	PV08_10726	A0A0D2BAH6	A0A0D1Y8X1	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-like domain-containing protein.	0.825
PV08_10350	PV08_00223	A0A0D1Y801	A0A0D2C7U5	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.968
PV08_10350	PV08_05618	A0A0D1Y801	A0A0D2BAH6	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.968
PV08_10350	PV08_10726	A0A0D1Y801	A0A0D1Y8X1	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.835
PV08_10350	PV08_11995	A0A0D1Y801	A0A0D2BEU4	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.916
PV08_10726	PV08_05618	A0A0D1Y8X1	A0A0D2BAH6	Ubiquitin-like domain-containing protein.	Ubiquitin-60S ribosomal protein L40.	0.825
PV08_10726	PV08_10350	A0A0D1Y8X1	A0A0D1Y801	Ubiquitin-like domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.835
PV08_10726	PV08_11995	A0A0D1Y8X1	A0A0D2BEU4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.825
PV08_11995	PV08_00223	A0A0D2BEU4	A0A0D2C7U5	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.825
PV08_11995	PV08_10350	A0A0D2BEU4	A0A0D1Y801	Ubiquitin-like domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.916
PV08_11995	PV08_10726	A0A0D2BEU4	A0A0D1Y8X1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.825