34 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_09411	Uncharacterized protein. (408 aa)
	PV08_08499	UBX domain-containing protein. (535 aa)
	PV08_08639	Uncharacterized protein. (272 aa)
	PV08_03225	Ubiquitin-like domain-containing protein. (749 aa)
	PV08_11004	Uncharacterized protein. (448 aa)
	PV08_08329	Ubiquitin-like domain-containing protein. (330 aa)
	PV08_07124	Uncharacterized protein. (394 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_07164	Uncharacterized protein. (203 aa)
	PV08_05493	MPN domain-containing protein. (636 aa)
	PV08_05568	Autophagy-related protein. (115 aa)
	PV08_06368	BAG domain-containing protein. (351 aa)
	PV08_04661	Ubiquitin-like domain-containing protein. (487 aa)
	PV08_01676	Rad60-SLD_2 domain-containing protein. (264 aa)
	PV08_10990	UBX domain-containing protein. (508 aa)
	PV08_09324	Uncharacterized protein. (404 aa)
	PV08_09740	Ubiquitin carboxyl-terminal hydrolase. (584 aa)
	PV08_08105	Ubiquitin-like domain-containing protein. (101 aa)
	PV08_08811	CAP-Gly domain-containing protein. (302 aa)
	PV08_10726	Ubiquitin-like domain-containing protein. (914 aa)
	PV08_08987	Uncharacterized protein. (347 aa)
	PV08_07429	Uncharacterized protein. (719 aa)
	PV08_05618	Ubiquitin-60S ribosomal protein L40. (151 aa)
	PV08_11995	Ubiquitin-like domain-containing protein. (1124 aa)
	PV08_04727	UBX domain-containing protein. (534 aa)
	PV08_04798	UBX domain-containing protein. (491 aa)
	PV08_11598	Uncharacterized protein. (224 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_05682	Uncharacterized protein. (316 aa)
	PV08_07609	RING-type domain-containing protein. (320 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_01682	Uncharacterized protein. (534 aa)
	PV08_09927	Uncharacterized protein. (304 aa)
	PV08_00928	UV excision repair protein Rad23. (839 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_00928	A0A0D2C7U5	A0A0D2BN39	Polyubiquitin.	UV excision repair protein Rad23.	0.984
PV08_00223	PV08_01676	A0A0D2C7U5	A0A0D2A8K2	Polyubiquitin.	Rad60-SLD_2 domain-containing protein.	0.669
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_03225	A0A0D2C7U5	A0A0D1YUK5	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.423
PV08_00223	PV08_04727	A0A0D2C7U5	A0A0D2BF06	Polyubiquitin.	UBX domain-containing protein.	0.774
PV08_00223	PV08_05493	A0A0D2C7U5	A0A0D1ZRQ4	Polyubiquitin.	MPN domain-containing protein.	0.986
PV08_00223	PV08_05568	A0A0D2C7U5	A0A0D1ZRY6	Polyubiquitin.	Autophagy-related protein.	0.737
PV08_00223	PV08_05618	A0A0D2C7U5	A0A0D2BAH6	Polyubiquitin.	Ubiquitin-60S ribosomal protein L40.	0.975
PV08_00223	PV08_07164	A0A0D2C7U5	A0A0D1ZNG6	Polyubiquitin.	Uncharacterized protein.	0.957
PV08_00223	PV08_08105	A0A0D2C7U5	A0A0D2B1Z0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.842
PV08_00223	PV08_08499	A0A0D2C7U5	A0A0D1YE02	Polyubiquitin.	UBX domain-containing protein.	0.658
PV08_00223	PV08_09324	A0A0D2C7U5	A0A0D2B047	Polyubiquitin.	Uncharacterized protein.	0.746
PV08_00223	PV08_09411	A0A0D2C7U5	A0A0D1YB45	Polyubiquitin.	Uncharacterized protein.	0.954
PV08_00223	PV08_09740	A0A0D2C7U5	A0A0D2B0L3	Polyubiquitin.	Ubiquitin carboxyl-terminal hydrolase.	0.992
PV08_00223	PV08_09927	A0A0D2C7U5	A0A0D2BNE1	Polyubiquitin.	Uncharacterized protein.	0.828
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_10990	A0A0D2C7U5	A0A0D2AY97	Polyubiquitin.	UBX domain-containing protein.	0.458
PV08_00223	PV08_11004	A0A0D2C7U5	A0A0D1ZFB3	Polyubiquitin.	Uncharacterized protein.	0.954
PV08_00223	PV08_11995	A0A0D2C7U5	A0A0D2BEU4	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.825
PV08_00928	PV08_00223	A0A0D2BN39	A0A0D2C7U5	UV excision repair protein Rad23.	Polyubiquitin.	0.984