61 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_06457	Uncharacterized protein. (67 aa)
	PV08_03948	VWFA domain-containing protein. (304 aa)
	PV08_03766	Uncharacterized protein. (165 aa)
	PV08_06568	Uncharacterized protein. (192 aa)
	PV08_06527	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (365 aa)
	PV08_05773	Uncharacterized protein. (2462 aa)
	PV08_05340	Uncharacterized protein. (712 aa)
	PV08_05330	Uncharacterized protein. (261 aa)
	PV08_05248	Uncharacterized protein. (943 aa)
	PV08_08987	Uncharacterized protein. (347 aa)
	PV08_09884	Zn(2)-C6 fungal-type domain-containing protein. (809 aa)
	PV08_10726	Ubiquitin-like domain-containing protein. (914 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_10335	Uncharacterized protein; Belongs to the BolA/IbaG family. (104 aa)
	PV08_11122	Uncharacterized protein. (424 aa)
	PV08_11992	Uncharacterized protein. (609 aa)
	PV08_01966	Uncharacterized protein. (370 aa)
	PV08_10251	Uncharacterized protein. (477 aa)
	PV08_10316	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (357 aa)
	PV08_08766	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (339 aa)
	PV08_09712	Uncharacterized protein. (266 aa)
	PV08_08958	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (152 aa)
	PV08_06668	Uncharacterized protein. (667 aa)
	PV08_06058	Uncharacterized protein. (747 aa)
	PV08_06363	MFS domain-containing protein. (556 aa)
	PV08_03815	RING-box protein 1. (125 aa)
	PV08_04792	Uncharacterized protein. (453 aa)
	PV08_04957	Uncharacterized protein. (170 aa)
	PV08_02560	Uncharacterized protein. (230 aa)
	PV08_02605	TYR_PHOSPHATASE_2 domain-containing protein. (291 aa)
	PV08_01152	Uncharacterized protein. (461 aa)
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_11564	G domain-containing protein. (778 aa)
	PV08_10259	BZIP domain-containing protein. (457 aa)
	PV08_10733	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (416 aa)
	PV08_10550	Protein kinase domain-containing protein. (435 aa)
	PV08_10605	BZIP domain-containing protein. (247 aa)
	PV08_02464	Metallophos domain-containing protein. (427 aa)
	PV08_00366	G domain-containing protein. (277 aa)
	PV08_01620	BZIP domain-containing protein. (341 aa)
	PV08_01956	Uncharacterized protein. (546 aa)
	PV08_09889	Zn(2)-C6 fungal-type domain-containing protein. (853 aa)
	PV08_08639	Uncharacterized protein. (272 aa)
	PV08_06535	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (491 aa)
	PV08_01119	Uncharacterized protein. (625 aa)
	PV08_00959	TYR_PHOSPHATASE_2 domain-containing protein. (447 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_03053	Uncharacterized protein. (441 aa)
	PV08_03994	APH domain-containing protein. (308 aa)
	PV08_06255	Uncharacterized protein. (217 aa)
	PV08_06100	Uncharacterized protein. (621 aa)
	PV08_07263	Uncharacterized protein. (942 aa)
	PV08_01965	Serine/threonine-protein phosphatase. (329 aa)
	PV08_01730	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (183 aa)
	PV08_01938	Uncharacterized protein. (248 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_01275	G domain-containing protein. (390 aa)
	PV08_10936	Protein kinase domain-containing protein. (523 aa)
	PV08_02653	Protein kinase domain-containing protein. (666 aa)
	PV08_02841	Translation initiation factor RLI1. (604 aa)
	PV08_10233	Uncharacterized protein. (455 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_01956	A0A0D2C7U5	A0A0D1Z139	Polyubiquitin.	Uncharacterized protein.	0.971
PV08_00223	PV08_01965	A0A0D2C7U5	A0A0D2BSH9	Polyubiquitin.	Serine/threonine-protein phosphatase.	0.694
PV08_00223	PV08_01966	A0A0D2C7U5	A0A0D1Z151	Polyubiquitin.	Uncharacterized protein.	0.685
PV08_00223	PV08_02464	A0A0D2C7U5	A0A0D1YSE9	Polyubiquitin.	Metallophos domain-containing protein.	0.620
PV08_00223	PV08_02841	A0A0D2C7U5	A0A0D2BHZ4	Polyubiquitin.	Translation initiation factor RLI1.	0.610
PV08_00223	PV08_03815	A0A0D2C7U5	A0A0D1ZV76	Polyubiquitin.	RING-box protein 1.	0.936
PV08_00223	PV08_03948	A0A0D2C7U5	A0A0D2BCQ4	Polyubiquitin.	VWFA domain-containing protein.	0.993
PV08_00223	PV08_05248	A0A0D2C7U5	A0A0D2B8E6	Polyubiquitin.	Uncharacterized protein.	0.617
PV08_00223	PV08_05340	A0A0D2C7U5	A0A0D2B9H2	Polyubiquitin.	Uncharacterized protein.	0.820
PV08_00223	PV08_05773	A0A0D2C7U5	A0A0D2B9R4	Polyubiquitin.	Uncharacterized protein.	0.666
PV08_00223	PV08_06100	A0A0D2C7U5	A0A0D2BXR6	Polyubiquitin.	Uncharacterized protein.	0.668
PV08_00223	PV08_07263	A0A0D2C7U5	A0A0D2BTB9	Polyubiquitin.	Uncharacterized protein.	0.820
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_01119	PV08_01620	A0A0D2CAG0	A0A0D1Z0E7	Uncharacterized protein.	BZIP domain-containing protein.	0.764
PV08_01119	PV08_01938	A0A0D2CAG0	A0A0D2BQT0	Uncharacterized protein.	Uncharacterized protein.	0.687
PV08_01119	PV08_01965	A0A0D2CAG0	A0A0D2BSH9	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.740
PV08_01119	PV08_02464	A0A0D2CAG0	A0A0D1YSE9	Uncharacterized protein.	Metallophos domain-containing protein.	0.692
PV08_01119	PV08_02560	A0A0D2CAG0	A0A0D1ZZW1	Uncharacterized protein.	Uncharacterized protein.	0.724