12 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_08105	Ubiquitin-like domain-containing protein. (101 aa)
	PV08_00952	ThiF domain-containing protein. (444 aa)
	PV08_06067	HTH CENPB-type domain-containing protein. (536 aa)
	PV08_02911	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	PV08_07687	Uncharacterized protein. (718 aa)
	PV08_07346	Uncharacterized protein. (438 aa)
	PV08_06989	Uncharacterized protein. (255 aa)
	PV08_08767	ULP_PROTEASE domain-containing protein. (1289 aa)
	PV08_02054	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (632 aa)
	PV08_00469	RWD domain-containing protein. (439 aa)
	PV08_07121	Uncharacterized protein. (276 aa)
	PV08_04093	ULP_PROTEASE domain-containing protein. (902 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00469	PV08_00952	A0A0D2C8M4	A0A0D2A6G8	RWD domain-containing protein.	ThiF domain-containing protein.	0.648
PV08_00469	PV08_02054	A0A0D2C8M4	A0A0D2CD81	RWD domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.550
PV08_00469	PV08_02911	A0A0D2C8M4	A0A0D2A0X4	RWD domain-containing protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.932
PV08_00952	PV08_00469	A0A0D2A6G8	A0A0D2C8M4	ThiF domain-containing protein.	RWD domain-containing protein.	0.648
PV08_00952	PV08_02054	A0A0D2A6G8	A0A0D2CD81	ThiF domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.999
PV08_00952	PV08_02911	A0A0D2A6G8	A0A0D2A0X4	ThiF domain-containing protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.984
PV08_00952	PV08_04093	A0A0D2A6G8	A0A0D2BD66	ThiF domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.609
PV08_00952	PV08_08105	A0A0D2A6G8	A0A0D2B1Z0	ThiF domain-containing protein.	Ubiquitin-like domain-containing protein.	0.989
PV08_00952	PV08_08767	A0A0D2A6G8	A0A0D2B3V4	ThiF domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.547
PV08_02054	PV08_00469	A0A0D2CD81	A0A0D2C8M4	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	RWD domain-containing protein.	0.550
PV08_02054	PV08_00952	A0A0D2CD81	A0A0D2A6G8	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	ThiF domain-containing protein.	0.999
PV08_02054	PV08_02911	A0A0D2CD81	A0A0D2A0X4	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.995
PV08_02054	PV08_04093	A0A0D2CD81	A0A0D2BD66	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	ULP_PROTEASE domain-containing protein.	0.614
PV08_02054	PV08_08105	A0A0D2CD81	A0A0D2B1Z0	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	Ubiquitin-like domain-containing protein.	0.999
PV08_02054	PV08_08767	A0A0D2CD81	A0A0D2B3V4	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	ULP_PROTEASE domain-containing protein.	0.698
PV08_02911	PV08_00469	A0A0D2A0X4	A0A0D2C8M4	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	RWD domain-containing protein.	0.932
PV08_02911	PV08_00952	A0A0D2A0X4	A0A0D2A6G8	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	ThiF domain-containing protein.	0.984
PV08_02911	PV08_02054	A0A0D2A0X4	A0A0D2CD81	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.995
PV08_02911	PV08_04093	A0A0D2A0X4	A0A0D2BD66	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	ULP_PROTEASE domain-containing protein.	0.622
PV08_02911	PV08_06067	A0A0D2A0X4	A0A0D1YM05	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	HTH CENPB-type domain-containing protein.	0.539