8 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_05977	HMG box domain-containing protein. (825 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_03042	HMG box domain-containing protein. (471 aa)
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_03090	Uncharacterized protein. (282 aa)
	PV08_07043	HMG box domain-containing protein. (412 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_01928	PV08_00223	A0A0D2BQS0	A0A0D2C7U5	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.835
PV08_03042	PV08_03090	A0A0D2BIH7	A0A0D1YU61	HMG box domain-containing protein.	Uncharacterized protein.	0.658
PV08_03042	PV08_05977	A0A0D2BIH7	A0A0D1ZT06	HMG box domain-containing protein.	HMG box domain-containing protein.	0.659
PV08_03042	PV08_07043	A0A0D2BIH7	A0A0D1YH10	HMG box domain-containing protein.	HMG box domain-containing protein.	0.659
PV08_03090	PV08_03042	A0A0D1YU61	A0A0D2BIH7	Uncharacterized protein.	HMG box domain-containing protein.	0.658
PV08_03090	PV08_05977	A0A0D1YU61	A0A0D1ZT06	Uncharacterized protein.	HMG box domain-containing protein.	0.765
PV08_03090	PV08_07043	A0A0D1YU61	A0A0D1YH10	Uncharacterized protein.	HMG box domain-containing protein.	0.765
PV08_05977	PV08_03042	A0A0D1ZT06	A0A0D2BIH7	HMG box domain-containing protein.	HMG box domain-containing protein.	0.659
PV08_05977	PV08_03090	A0A0D1ZT06	A0A0D1YU61	HMG box domain-containing protein.	Uncharacterized protein.	0.765
PV08_07043	PV08_03042	A0A0D1YH10	A0A0D2BIH7	HMG box domain-containing protein.	HMG box domain-containing protein.	0.659
PV08_07043	PV08_03090	A0A0D1YH10	A0A0D1YU61	HMG box domain-containing protein.	Uncharacterized protein.	0.765
PV08_10350	PV08_00223	A0A0D1Y801	A0A0D2C7U5	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.968
PV08_11376	PV08_00223	A0A0D2AUK8	A0A0D2C7U5	BZIP domain-containing protein.	Polyubiquitin.	0.961