19 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01966	Uncharacterized protein. (370 aa)
	PV08_11344	UBIQUITIN_CONJUGAT_2 domain-containing protein. (164 aa)
	PV08_03454	WD_REPEATS_REGION domain-containing protein. (611 aa)
	PV08_05547	Uncharacterized protein. (1399 aa)
	PV08_08289	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (349 aa)
	PV08_06113	AAA domain-containing protein. (477 aa)
	PV08_11154	WD_REPEATS_REGION domain-containing protein. (580 aa)
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_03836	Protein kinase domain-containing protein. (761 aa)
	PV08_10293	HORMA domain-containing protein. (226 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_06745	WD_REPEATS_REGION domain-containing protein. (643 aa)
	PV08_06930	TPR_REGION domain-containing protein. (770 aa)
	PV08_03173	Uncharacterized protein. (456 aa)
	PV08_03421	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_07158	TYR_PHOSPHATASE_2 domain-containing protein. (646 aa)
	PV08_09068	WD_REPEATS_REGION domain-containing protein. (350 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_01966	A0A0D2C7U5	A0A0D1Z151	Polyubiquitin.	Uncharacterized protein.	0.685
PV08_00223	PV08_03173	A0A0D2C7U5	A0A0D2C5P2	Polyubiquitin.	Uncharacterized protein.	0.647
PV08_00223	PV08_03421	A0A0D2C7U5	A0A0D2C6D8	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.907
PV08_00223	PV08_03454	A0A0D2C7U5	A0A0D1YV46	Polyubiquitin.	WD_REPEATS_REGION domain-containing protein.	0.785
PV08_00223	PV08_05547	A0A0D2C7U5	A0A0D1YKL4	Polyubiquitin.	Uncharacterized protein.	0.659
PV08_00223	PV08_06113	A0A0D2C7U5	A0A0D1ZTG9	Polyubiquitin.	AAA domain-containing protein.	0.843
PV08_00223	PV08_06745	A0A0D2C7U5	A0A0D2BRX2	Polyubiquitin.	WD_REPEATS_REGION domain-containing protein.	0.785
PV08_00223	PV08_06930	A0A0D2C7U5	A0A0D2BSD8	Polyubiquitin.	TPR_REGION domain-containing protein.	0.907
PV08_00223	PV08_08289	A0A0D2C7U5	A0A0D1ZJV9	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.951
PV08_00223	PV08_09068	A0A0D2C7U5	A0A0D1YA11	Polyubiquitin.	WD_REPEATS_REGION domain-containing protein.	0.688
PV08_00223	PV08_10293	A0A0D2C7U5	A0A0D2BI20	Polyubiquitin.	HORMA domain-containing protein.	0.734
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11154	A0A0D2C7U5	A0A0D2ATX5	Polyubiquitin.	WD_REPEATS_REGION domain-containing protein.	0.785
PV08_00223	PV08_11344	A0A0D2C7U5	A0A0D1ZBI9	Polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.892
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_01928	PV08_00223	A0A0D2BQS0	A0A0D2C7U5	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.835
PV08_01928	PV08_01966	A0A0D2BQS0	A0A0D1Z151	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.658
PV08_01928	PV08_03173	A0A0D2BQS0	A0A0D2C5P2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.651
PV08_01928	PV08_03421	A0A0D2BQS0	A0A0D2C6D8	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.763