23 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_02128	Uncharacterized protein. (1680 aa)
	PV08_01383	Uncharacterized protein. (451 aa)
	PV08_00468	RanBD1 domain-containing protein. (506 aa)
	PV08_09276	RanBD1 domain-containing protein. (244 aa)
	PV08_10468	Nsp1_C domain-containing protein. (657 aa)
	PV08_09284	Uncharacterized protein. (779 aa)
	PV08_09817	Nucleolar protein 58. (632 aa)
	PV08_08105	Ubiquitin-like domain-containing protein. (101 aa)
	PV08_08260	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (929 aa)
	PV08_07628	Uncharacterized protein. (925 aa)
	PV08_07832	C3H1-type domain-containing protein. (629 aa)
	PV08_06431	TPR_MLP1_2 domain-containing protein. (2030 aa)
	PV08_03456	WD_REPEATS_REGION domain-containing protein. (362 aa)
	PV08_00176	Uncharacterized protein. (1363 aa)
	PV08_09306	Nup54 domain-containing protein. (435 aa)
	PV08_08094	Nup188_C domain-containing protein. (1820 aa)
	PV08_02911	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	PV08_00216	Uncharacterized protein. (1126 aa)
	PV08_11737	Uncharacterized protein. (211 aa)
	PV08_05771	Peptidase S59 domain-containing protein. (1820 aa)
	PV08_00487	UBIQUITIN_CONJUGAT_2 domain-containing protein. (667 aa)
	PV08_11988	Uncharacterized protein. (681 aa)
	PV08_11941	Uncharacterized protein. (1346 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00176	PV08_00216	A0A0D2BKY2	A0A0D2A470	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_00468	A0A0D2BKY2	A0A0D2BLS3	Uncharacterized protein.	RanBD1 domain-containing protein.	0.926
PV08_00176	PV08_00487	A0A0D2BKY2	A0A0D2A536	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.713
PV08_00176	PV08_02128	A0A0D2BKY2	A0A0D2BR97	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_02911	A0A0D2BKY2	A0A0D2A0X4	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.754
PV08_00176	PV08_03456	A0A0D2BKY2	A0A0D2BJS0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.990
PV08_00176	PV08_05771	A0A0D2BKY2	A0A0D1YL06	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
PV08_00176	PV08_06431	A0A0D2BKY2	A0A0D2BCN5	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.819
PV08_00176	PV08_07832	A0A0D2BKY2	A0A0D2B8S2	Uncharacterized protein.	C3H1-type domain-containing protein.	0.651
PV08_00176	PV08_08094	A0A0D2BKY2	A0A0D1ZJ83	Uncharacterized protein.	Nup188_C domain-containing protein.	0.956
PV08_00176	PV08_08105	A0A0D2BKY2	A0A0D2B1Z0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.656
PV08_00176	PV08_08260	A0A0D2BKY2	A0A0D2B2F3	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.991
PV08_00176	PV08_09276	A0A0D2BKY2	A0A0D1ZGB9	Uncharacterized protein.	RanBD1 domain-containing protein.	0.928
PV08_00176	PV08_09284	A0A0D2BKY2	A0A0D2B024	Uncharacterized protein.	Uncharacterized protein.	0.928
PV08_00176	PV08_09306	A0A0D2BKY2	A0A0D1ZGE6	Uncharacterized protein.	Nup54 domain-containing protein.	0.995
PV08_00176	PV08_10468	A0A0D2BKY2	A0A0D2AWU1	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.982
PV08_00176	PV08_11737	A0A0D2BKY2	A0A0D1Y4W2	Uncharacterized protein.	Uncharacterized protein.	0.819
PV08_00176	PV08_11941	A0A0D2BKY2	A0A0D2ATJ2	Uncharacterized protein.	Uncharacterized protein.	0.991
PV08_00176	PV08_11988	A0A0D2BKY2	A0A0D1ZA39	Uncharacterized protein.	Uncharacterized protein.	0.543
PV08_00216	PV08_00176	A0A0D2A470	A0A0D2BKY2	Uncharacterized protein.	Uncharacterized protein.	0.999