18 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_06286	Zds_C domain-containing protein. (916 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_09008	CCHC-type domain-containing protein. (938 aa)
	PV08_07983	Uncharacterized protein. (151 aa)
	PV08_03721	Uncharacterized protein. (265 aa)
	PV08_06173	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	PV08_01626	Uncharacterized protein. (111 aa)
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_10157	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1177 aa)
	PV08_08985	HTH myb-type domain-containing protein. (556 aa)
	PV08_05603	Uncharacterized protein. (165 aa)
	PV08_05765	UmuC domain-containing protein. (593 aa)
	PV08_11884	Amino_oxidase domain-containing protein. (534 aa)
	PV08_01969	CCHC-type domain-containing protein. (393 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_01684	AAA domain-containing protein. (1093 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_10007	Uncharacterized protein. (134 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_01626	A0A0D2C7U5	A0A0D2A8F9	Polyubiquitin.	Uncharacterized protein.	0.423
PV08_00223	PV08_01684	A0A0D2C7U5	A0A0D2BRS7	Polyubiquitin.	AAA domain-containing protein.	0.656
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_01969	A0A0D2C7U5	A0A0D2CD06	Polyubiquitin.	CCHC-type domain-containing protein.	0.423
PV08_00223	PV08_03721	A0A0D2C7U5	A0A0D1YVX7	Polyubiquitin.	Uncharacterized protein.	0.423
PV08_00223	PV08_05603	A0A0D2C7U5	A0A0D2BAG5	Polyubiquitin.	Uncharacterized protein.	0.423
PV08_00223	PV08_05765	A0A0D2C7U5	A0A0D2BAT9	Polyubiquitin.	UmuC domain-containing protein.	0.949
PV08_00223	PV08_06173	A0A0D2C7U5	A0A0D1ZTL9	Polyubiquitin.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.657
PV08_00223	PV08_06286	A0A0D2C7U5	A0A0D2BC81	Polyubiquitin.	Zds_C domain-containing protein.	0.423
PV08_00223	PV08_07983	A0A0D2C7U5	A0A0D1YCV9	Polyubiquitin.	Uncharacterized protein.	0.423
PV08_00223	PV08_08985	A0A0D2C7U5	A0A0D2B4A3	Polyubiquitin.	HTH myb-type domain-containing protein.	0.423
PV08_00223	PV08_09008	A0A0D2C7U5	A0A0D1Y9T5	Polyubiquitin.	CCHC-type domain-containing protein.	0.423
PV08_00223	PV08_10007	A0A0D2C7U5	A0A0D2BNM0	Polyubiquitin.	Uncharacterized protein.	0.423
PV08_00223	PV08_10157	A0A0D2C7U5	A0A0D2AVU0	Polyubiquitin.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.842
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_00223	PV08_11884	A0A0D2C7U5	A0A0D2BEF8	Polyubiquitin.	Amino_oxidase domain-containing protein.	0.423
PV08_01626	PV08_00223	A0A0D2A8F9	A0A0D2C7U5	Uncharacterized protein.	Polyubiquitin.	0.423
PV08_01626	PV08_06173	A0A0D2A8F9	A0A0D1ZTL9	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.928
PV08_01684	PV08_00223	A0A0D2BRS7	A0A0D2C7U5	AAA domain-containing protein.	Polyubiquitin.	0.656