STRINGSTRING
PV08_05340 PV08_05340 PV08_11376 PV08_11376 PV08_01966 PV08_01966 PV08_00223 PV08_00223 PV08_07263 PV08_07263 PV08_10350 PV08_10350 PV08_03948 PV08_03948 PV08_05773 PV08_05773
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_05340Uncharacterized protein. (712 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_01966Uncharacterized protein. (370 aa)
PV08_00223Polyubiquitin. (305 aa)
PV08_07263Uncharacterized protein. (942 aa)
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_03948VWFA domain-containing protein. (304 aa)
PV08_05773Uncharacterized protein. (2462 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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