STRINGSTRING
PV08_05544 PV08_05544 PV08_03988 PV08_03988 PV08_04241 PV08_04241 PV08_03390 PV08_03390 PV08_01928 PV08_01928 PV08_00223 PV08_00223 PV08_10350 PV08_10350 PV08_05051 PV08_05051 PV08_09422 PV08_09422 PV08_11376 PV08_11376
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_05544BRO1 domain-containing protein. (854 aa)
PV08_03988BRO1 domain-containing protein. (1073 aa)
PV08_04241Uncharacterized protein. (1610 aa)
PV08_03390CHAT domain-containing protein. (337 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_00223Polyubiquitin. (305 aa)
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_05051Uncharacterized protein. (498 aa)
PV08_09422Uncharacterized protein. (287 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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